Difference between revisions of "RXN-13415"
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(Created page with "Category:reaction == Reaction NITRATREDUCT-RXN == * direction: ** reversible * common-name: ** nitrate reductase == Reaction formula == * 1.0 Acceptor[c] '''+''' 1.0 [...") |
(Created page with "Category:reaction == Reaction RXN-11555 == * direction: ** left-to-right * common-name: ** dermatan 4-sulfotransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.8.2.3...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction RXN-11555 == |
* direction: | * direction: | ||
| − | ** | + | ** left-to-right |
* common-name: | * common-name: | ||
| − | ** | + | ** dermatan 4-sulfotransferase |
| + | * ec-number: | ||
| + | ** [http://enzyme.expasy.org/EC/2.8.2.35 ec-2.8.2.35] | ||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 | + | * 1 [[Dermatan-NacGal]][c] '''+''' 1 [[PAPS]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[Dermatan-NAcGal-4-sulfates]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ11262]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[PWY-6568]], dermatan sulfate biosynthesis (late stages): | ||
| + | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
| − | {{#set: direction= | + | * RHEA: |
| − | {{#set: common-name= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=48053 48053] |
| − | {{#set: nb gene associated= | + | {{#set: direction=left-to-right}} |
| − | {{#set: nb pathway associated= | + | {{#set: common-name=dermatan 4-sulfotransferase}} |
| + | {{#set: ec-number=ec-2.8.2.35}} | ||
| + | {{#set: nb gene associated=1}} | ||
| + | {{#set: nb pathway associated=1}} | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=saccharina_japonica_genome}} | {{#set: reconstruction source=saccharina_japonica_genome}} | ||
Revision as of 13:19, 14 January 2021
Contents
Reaction RXN-11555
- direction:
- left-to-right
- common-name:
- dermatan 4-sulfotransferase
- ec-number:
Reaction formula
- 1 Dermatan-NacGal[c] + 1 PAPS[c] => 1 3-5-ADP[c] + 1 Dermatan-NAcGal-4-sulfates[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ11262
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6568, dermatan sulfate biosynthesis (late stages):
- 2 reactions found over 4 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- RHEA:
