Difference between revisions of "RXN-13416"

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(Created page with "Category:reaction == Reaction HEMEOSYN-RXN == * direction: ** left-to-right * common-name: ** heme o biosynthesis ** protoheme ix farnesyltransferase * ec-number: ** [http...")
(Created page with "Category:reaction == Reaction RXN-17927 == * direction: ** left-to-right == Reaction formula == * 1 3Prime-OH-Terminated-RNAs[c] '''+''' 1 A-5-prime-PP-5-prime-RNA...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction HEMEOSYN-RXN ==
+
== Reaction RXN-17927 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** heme o biosynthesis
 
** protoheme ix farnesyltransferase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/2.5.1.141 ec-2.5.1.141]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[FARNESYL-PP]][c] '''+''' 1 [[PROTOHEME]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-17063]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[3Prime-OH-Terminated-RNAs]][c] '''+''' 1 [[A-5-prime-PP-5-prime-RNA]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[RNA-Holder]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ10781]]
+
* Gene: [[SJ03634]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7856]], heme a biosynthesis:
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28071 28071]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R07411 R07411]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=protoheme ix farnesyltransferase|heme o biosynthesis}}
 
{{#set: ec-number=ec-2.5.1.141}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:31, 5 January 2021

Reaction RXN-17927

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links