Difference between revisions of "RXN-13416"
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(Created page with "Category:reaction == Reaction RXN-17927 == * direction: ** left-to-right == Reaction formula == * 1 3Prime-OH-Terminated-RNAs[c] '''+''' 1 A-5-prime-PP-5-prime-RNA...") |
(Created page with "Category:reaction == Reaction RXN-8032 == * direction: ** reversible * common-name: ** 3-ketopimelyl-coa thiolase * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction RXN- | + | == Reaction RXN-8032 == |
* direction: | * direction: | ||
| − | ** | + | ** reversible |
| + | * common-name: | ||
| + | ** 3-ketopimelyl-coa thiolase | ||
| + | * ec-number: | ||
| + | ** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1] | ||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[3-OXOPIMELOYL-COA]][c] '''+''' 1 [[CO-A]][c] '''<=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[GLUTARYL-COA]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ15041]] |
| − | ** Category: [[ | + | ** Category: [[orthology]] |
| − | *** Source: [[ | + | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[P321-PWY]], benzoyl-CoA degradation III (anaerobic): | ||
| + | ** '''1''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-7401]], crotonate fermentation (to acetate and cyclohexane carboxylate): | ||
| + | ** '''6''' reactions found over '''15''' reactions in the full pathway | ||
| + | * [[CENTBENZCOA-PWY]], benzoyl-CoA degradation II (anaerobic): | ||
| + | ** '''1''' reactions found over '''7''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * category: [[ | + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| + | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
| − | {{#set: direction= | + | * LIGAND-RXN: |
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R05586 R05586] | ||
| + | {{#set: direction=reversible}} | ||
| + | {{#set: common-name=3-ketopimelyl-coa thiolase}} | ||
| + | {{#set: ec-number=ec-2.3.1}} | ||
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
| − | {{#set: reconstruction category= | + | {{#set: reconstruction category=orthology}} |
| − | {{#set: reconstruction tool= | + | {{#set: reconstruction tool=pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 13:13, 14 January 2021
Contents
Reaction RXN-8032
- direction:
- reversible
- common-name:
- 3-ketopimelyl-coa thiolase
- ec-number:
Reaction formula
- 1 3-OXOPIMELOYL-COA[c] + 1 CO-A[c] <=> 1 ACETYL-COA[c] + 1 GLUTARYL-COA[c]
Gene(s) associated with this reaction
- Gene: SJ15041
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- P321-PWY, benzoyl-CoA degradation III (anaerobic):
- 1 reactions found over 9 reactions in the full pathway
- PWY-7401, crotonate fermentation (to acetate and cyclohexane carboxylate):
- 6 reactions found over 15 reactions in the full pathway
- CENTBENZCOA-PWY, benzoyl-CoA degradation II (anaerobic):
- 1 reactions found over 7 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
External links
- LIGAND-RXN:
