Difference between revisions of "RXN-13430"

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(Created page with "Category:reaction == Reaction NADPH-DEHYDROGENASE-RXN == * direction: ** reversible * common-name: ** nadph dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.6....")
(Created page with "Category:reaction == Reaction RXN-13441 == * direction: ** left-to-right * common-name: ** 3-oxo-icosatrienoyl-coa synthase * ec-number: ** [http://enzyme.expasy.org/EC/2....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction NADPH-DEHYDROGENASE-RXN ==
+
== Reaction RXN-13441 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** nadph dehydrogenase
+
** 3-oxo-icosatrienoyl-coa synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.6.99.1 ec-1.6.99.1]
+
** [http://enzyme.expasy.org/EC/2.3.1.199 ec-2.3.1.199]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Acceptor]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[Donor-H2]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[LINOLENOYL-COA]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-14422]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ22257]]
+
* Gene: [[SJ11672]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ19629]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ06616]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ00613]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7724]], icosapentaenoate biosynthesis III (8-desaturase, mammals):
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7619]], juniperonate biosynthesis:
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7602]], icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes):
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=left-to-right}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13152 13152]
+
{{#set: common-name=3-oxo-icosatrienoyl-coa synthase}}
−
* LIGAND-RXN:
+
{{#set: ec-number=ec-2.3.1.199}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00282 R00282]
+
{{#set: nb gene associated=4}}
−
* UNIPROT:
+
{{#set: nb pathway associated=3}}
−
** [http://www.uniprot.org/uniprot/P43084 P43084]
 
−
** [http://www.uniprot.org/uniprot/Q02899 Q02899]
 
−
** [http://www.uniprot.org/uniprot/Q03558 Q03558]
 
−
** [http://www.uniprot.org/uniprot/P41816 P41816]
 
−
** [http://www.uniprot.org/uniprot/Q42850 Q42850]
 
−
** [http://www.uniprot.org/uniprot/P40952 P40952]
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=nadph dehydrogenase}}
 
−
{{#set: ec-number=ec-1.6.99.1}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=0}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:05, 5 January 2021

Reaction RXN-13441

  • direction:
    • left-to-right
  • common-name:
    • 3-oxo-icosatrienoyl-coa synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7724, icosapentaenoate biosynthesis III (8-desaturase, mammals):
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-7619, juniperonate biosynthesis:
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7602, icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes):
    • 4 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-13430&oldid=63786"