Difference between revisions of "RXN-13444"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BETAGALACTOSID-RXN BETAGALACTOSID-RXN] == * direction: ** left-to-right * common-name: ** β-ga...")
(Created page with "Category:reaction == Reaction RXN-13444 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.134 ec-4.2.1.134] == Reaction formula == * 1 ...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BETAGALACTOSID-RXN BETAGALACTOSID-RXN] ==
+
== Reaction RXN-13444 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** β-galactosidase
 
−
** beta-galactosidase
 
−
** lactose galactohydrolase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.2.1.108 ec-3.2.1.108]
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** [http://enzyme.expasy.org/EC/4.2.1.134 ec-4.2.1.134]
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** [http://enzyme.expasy.org/EC/3.2.1.23 ec-3.2.1.23]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-15972]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GALACTOSE]][c] '''+''' 1 [[Glucopyranose]][c]
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* 1 [[CPD-14424]][c] '''=>''' 1 [[CPD-14425]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ14193]]
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* Gene: [[SJ00783]]
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** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ10277]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ06882]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ04558]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ03139]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[BGALACT-PWY]], lactose degradation III: [http://metacyc.org/META/NEW-IMAGE?object=BGALACT-PWY BGALACT-PWY]
+
* [[PWY-7053]], docosahexaenoate biosynthesis I (lower eukaryotes):
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals):
 +
** '''8''' reactions found over '''14''' reactions in the full pathway
 +
* [[PWY-7727]], docosahexaenoate biosynthesis IV (4-desaturase, mammals):
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
* METANETX-RXN : MNXR118086
−
** [http://www.uniprot.org/uniprot/Q29522 Q29522]
 
−
** [http://www.uniprot.org/uniprot/Q29521 Q29521]
 
−
** [http://www.uniprot.org/uniprot/Q29519 Q29519]
 
−
** [http://www.uniprot.org/uniprot/Q29518 Q29518]
 
−
** [http://www.uniprot.org/uniprot/P09849 P09849]
 
−
** [http://www.uniprot.org/uniprot/P09848 P09848]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01100 R01100]
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10076 10076]
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28659 28659]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=lactose galactohydrolase|β-galactosidase|beta-galactosidase}}
+
{{#set: ec-number=ec-4.2.1.134}}
−
{{#set: ec-number=ec-3.2.1.108|ec-3.2.1.23}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb pathway associated=3}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN-13444

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7053, docosahexaenoate biosynthesis I (lower eukaryotes):
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals):
    • 8 reactions found over 14 reactions in the full pathway
  • PWY-7727, docosahexaenoate biosynthesis IV (4-desaturase, mammals):
    • 2 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR118086





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