Difference between revisions of "RXN-13444"

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(Created page with "Category:reaction == Reaction GLUTACONYL-COA-DECARBOXYLASE-RXN == * direction: ** reversible * common-name: ** glutaconyl-coa decarboxylase * ec-number: ** [http://enzyme....")
(Created page with "Category:reaction == Reaction RXN-13444 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.134 ec-4.2.1.134] == Reaction formula == * 1 ...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction GLUTACONYL-COA-DECARBOXYLASE-RXN ==
+
== Reaction RXN-13444 ==
 
* direction:
 
* direction:
** reversible
+
** left-to-right
* common-name:
 
** glutaconyl-coa decarboxylase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/4.1.1.70 ec-4.1.1.70]
+
** [http://enzyme.expasy.org/EC/4.2.1.134 ec-4.2.1.134]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[GLUTACONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CROTONYL-COA]][c]
+
* 1 [[CPD-14424]][c] '''=>''' 1 [[CPD-14425]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ07909]]
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* Gene: [[SJ00783]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ06882]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7401]], crotonate fermentation (to acetate and cyclohexane carboxylate):
+
* [[PWY-7053]], docosahexaenoate biosynthesis I (lower eukaryotes):
** '''6''' reactions found over '''15''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
* [[PWY-5177]], glutaryl-CoA degradation:
+
* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals):
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''8''' reactions found over '''14''' reactions in the full pathway
* [[P162-PWY]], L-glutamate degradation V (via hydroxyglutarate):
+
* [[PWY-7727]], docosahexaenoate biosynthesis IV (4-desaturase, mammals):
** '''7''' reactions found over '''11''' reactions in the full pathway
+
** '''2''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
+
* METANETX-RXN : MNXR118086
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23972 23972]
+
{{#set: direction=left-to-right}}
* LIGAND-RXN:
+
{{#set: ec-number=ec-4.2.1.134}}
** [http://www.genome.jp/dbget-bin/www_bget?R03028 R03028]
+
{{#set: nb gene associated=2}}
{{#set: direction=reversible}}
 
{{#set: common-name=glutaconyl-coa decarboxylase}}
 
{{#set: ec-number=ec-4.1.1.70}}
 
{{#set: nb gene associated=1}}
 
 
{{#set: nb pathway associated=3}}
 
{{#set: nb pathway associated=3}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN-13444

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7053, docosahexaenoate biosynthesis I (lower eukaryotes):
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals):
    • 8 reactions found over 14 reactions in the full pathway
  • PWY-7727, docosahexaenoate biosynthesis IV (4-desaturase, mammals):
    • 2 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR118086