Difference between revisions of "RXN-13506"

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(Created page with "Category:reaction == Reaction RXN-17888 == * direction: ** left-to-right * common-name: ** arginyl-trna--protein transferase * ec-number: ** [http://enzyme.expasy.org/EC/2...")
(Created page with "Category:reaction == Reaction DSERDEAM-RXN == * direction: ** left-to-right * common-name: ** d-serine ammonia-lyase * ec-number: ** [http://enzyme.expasy.org/EC/4.3.1.18...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-17888 ==
+
== Reaction DSERDEAM-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** arginyl-trna--protein transferase
+
** d-serine ammonia-lyase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.3.2.8 ec-2.3.2.8]
+
** [http://enzyme.expasy.org/EC/4.3.1.18 ec-4.3.1.18]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Charged-ARG-tRNAs]][c] '''+''' 1 [[L-Glutamyl-Peptides]][c] '''=>''' 1 [[ARG-tRNAs]][c] '''+''' 1 [[L-arginyl-L-Glutamyl-Peptides]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[D-SERINE]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[PYRUVATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ03517]]
+
* Gene: [[SJ15468]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7799]], Arg/N-end rule pathway (eukaryotic):
 
** '''7''' reactions found over '''14''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13978 13978]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00221 R00221]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P00926 P00926]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=arginyl-trna--protein transferase}}
+
{{#set: common-name=d-serine ammonia-lyase}}
{{#set: ec-number=ec-2.3.2.8}}
+
{{#set: ec-number=ec-4.3.1.18}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:33, 5 January 2021

Reaction DSERDEAM-RXN

  • direction:
    • left-to-right
  • common-name:
    • d-serine ammonia-lyase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links