Difference between revisions of "RXN-13506"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5217 RXN0-5217] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GGPS GGPS] == * direction: ** left-to-right * common-name: ** geranylgeranyl diphosphate synthase =...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5217 RXN0-5217] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GGPS GGPS] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* ec-number:
+
* common-name:
** [http://enzyme.expasy.org/EC/2.5.1 ec-2.5.1]
+
** geranylgeranyl diphosphate synthase
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CADAVERINE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINAMINE]][c] '''=>''' 1 [[5-METHYLTHIOADENOSINE]][c] '''+''' 1 [[CPD0-1065]][c] '''+''' 1 [[PROTON]][c]
+
* 1.0 [[DELTA3-ISOPENTENYL-PP]][h] '''+''' 1.0 [[FARNESYL-PP]][h] '''=>''' 1.0 [[GERANYLGERANYL-PP]][h] '''+''' 1.0 [[PPI]][h] '''+''' 1.0 [[PROTON]][h]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ19088]]
+
* Gene: [[SJ10346]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY0-1303]], aminopropylcadaverine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1303 PWY0-1303]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33388 33388]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R08359 R08359]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: ec-number=ec-2.5.1}}
+
{{#set: common-name=geranylgeranyl diphosphate synthase}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 09:31, 27 August 2019

Reaction GGPS

  • direction:
    • left-to-right
  • common-name:
    • geranylgeranyl diphosphate synthase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links