Difference between revisions of "RXN-13588"

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(Created page with "Category:reaction == Reaction RXN-9548 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.1.2.14 ec-3.1.2.14] == Reaction formula == * 1 Ste...")
(Created page with "Category:reaction == Reaction 2.3.1.180-RXN == * direction: ** left-to-right * common-name: ** β-ketoacyl-acp synthase * ec-number: ** [http://enzyme.expasy.org/EC/2....")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-9548 ==
+
== Reaction 2.3.1.180-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** β-ketoacyl-acp synthase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/3.1.2.14 ec-3.1.2.14]
+
** [http://enzyme.expasy.org/EC/2.3.1.180 ec-2.3.1.180]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Stearoyl-ACPs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[STEARIC_ACID]][c]
+
* 1 [[ACETYL-COA]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[Acetoacetyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ15983]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5989]], stearate biosynthesis II (bacteria and plants):
+
* [[PWY-4381]], fatty acid biosynthesis initiation (type II):
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R10707 R10707]
 +
* METANETX-RXN : MNXR100913
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12083 12083]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: ec-number=ec-3.1.2.14}}
+
{{#set: common-name=β-ketoacyl-acp synthase}}
{{#set: nb gene associated=0}}
+
{{#set: ec-number=ec-2.3.1.180}}
 +
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=gap-filling}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 08:40, 15 March 2021

Reaction 2.3.1.180-RXN

  • direction:
    • left-to-right
  • common-name:
    • β-ketoacyl-acp synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-4381, fatty acid biosynthesis initiation (type II):
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR100913
  • RHEA: