Difference between revisions of "RXN-13641"

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(Created page with "Category:reaction == Reaction BUTYRYL-COA-DEHYDROGENASE-RXN == * direction: ** left-to-right * common-name: ** butanoyl-coa dehydrogenase * ec-number: ** [http://enzyme.ex...")
(Created page with "Category:reaction == Reaction RXN-13641 == * direction: ** reversible * common-name: ** β-carotene isomerase * ec-number: ** [http://enzyme.expasy.org/EC/5.2.1.14 ec-...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction BUTYRYL-COA-DEHYDROGENASE-RXN ==
+
== Reaction RXN-13641 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** butanoyl-coa dehydrogenase
+
** β-carotene isomerase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.3.8.1 ec-1.3.8.1]
+
** [http://enzyme.expasy.org/EC/5.2.1.14 ec-5.2.1.14]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CROTONYL-COA]][c] '''+''' 1 [[ETF-Reduced]][c] '''=>''' 1 [[BUTYRYL-COA]][c] '''+''' 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD1F-129]][c] '''<=>''' 1 [[CPD-14646]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19669]]
+
* Gene: [[SJ06689]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ20376]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ18022]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6583]], pyruvate fermentation to butanol I:
+
* [[PWY-7101]], 5-deoxystrigol biosynthesis:
−
** '''6''' reactions found over '''8''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
−
* [[P163-PWY]], L-lysine fermentation to acetate and butanoate:
 
−
** '''3''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-5022]], 4-aminobutanoate degradation V:
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5676]], acetyl-CoA fermentation to butanoate II:
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5677]], succinate fermentation to butanoate:
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
−
* [[CENTFERM-PWY]], pyruvate fermentation to butanoate:
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[P162-PWY]], L-glutamate degradation V (via hydroxyglutarate):
 
−
** '''7''' reactions found over '''10''' reactions in the full pathway
 
−
* [[P3-PWY]], gallate degradation III (anaerobic):
 
−
** '''3''' reactions found over '''11''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR115742
+
* METANETX-RXN : MNXR113639
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R10282 R10282]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24006 24006]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34458 34458]
−
* LIGAND-RXN:
+
{{#set: direction=reversible}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01178 R01178]
+
{{#set: common-name=&beta;-carotene isomerase}}
−
{{#set: direction=left-to-right}}
+
{{#set: ec-number=ec-5.2.1.14}}
−
{{#set: common-name=butanoyl-coa dehydrogenase}}
+
{{#set: nb gene associated=3}}
−
{{#set: ec-number=ec-1.3.8.1}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=8}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN-13641

  • direction:
    • reversible
  • common-name:
    • β-carotene isomerase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7101, 5-deoxystrigol biosynthesis:
    • 1 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR113639
  • LIGAND-RXN:
  • RHEA:





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