Difference between revisions of "RXN-13675"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.2.25-RXN 6.3.2.25-RXN] == * direction: ** left-to-right * common-name: ** tubulin-tyrosine liga...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALKAPHOSPHA-RXN ALKAPHOSPHA-RXN] == * direction: ** left-to-right * common-name: ** alkaline phosph...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.2.25-RXN 6.3.2.25-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALKAPHOSPHA-RXN ALKAPHOSPHA-RXN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** tubulin-tyrosine ligase
+
** alkaline phosphatase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.3.2.25 ec-6.3.2.25]
+
** [http://enzyme.expasy.org/EC/3.1.3.1 ec-3.1.3.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[Detyrosinated-alpha--tubulins]][c] '''+''' 1 [[TYR]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Alpha-tubulins]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[Orthophosphoric-Monoesters]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Alcohols]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ13017]]
−
* Gene: [[SJ21563]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ22079]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ00218]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ03297]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ19915]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ08327]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ19490]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ06727]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ21215]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
* Gene: [[SJ07175]]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ11088]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
* Gene: [[SJ03083]]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ01423]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
* Gene: [[SJ19648]]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ13863]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
* Gene: [[SJ18654]]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ16360]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15018 15018]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04730 R04730]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00626 R00626]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P38160 P38160]
+
** [http://www.uniprot.org/uniprot/P08289 P08289]
 +
** [http://www.uniprot.org/uniprot/P09487 P09487]
 +
** [http://www.uniprot.org/uniprot/Q8JZS4 Q8JZS4]
 +
** [http://www.uniprot.org/uniprot/Q05205 Q05205]
 +
** [http://www.uniprot.org/uniprot/P24822 P24822]
 +
** [http://www.uniprot.org/uniprot/P19406 P19406]
 +
** [http://www.uniprot.org/uniprot/P19405 P19405]
 +
** [http://www.uniprot.org/uniprot/Q9UZV2 Q9UZV2]
 +
** [http://www.uniprot.org/uniprot/P21948 P21948]
 +
** [http://www.uniprot.org/uniprot/Q47487 Q47487]
 +
** [http://www.uniprot.org/uniprot/P00634 P00634]
 +
** [http://www.uniprot.org/uniprot/Q47489 Q47489]
 +
** [http://www.uniprot.org/uniprot/Q47488 Q47488]
 +
** [http://www.uniprot.org/uniprot/Q47486 Q47486]
 +
** [http://www.uniprot.org/uniprot/Q47485 Q47485]
 +
** [http://www.uniprot.org/uniprot/Q47484 Q47484]
 +
** [http://www.uniprot.org/uniprot/P05187 P05187]
 +
** [http://www.uniprot.org/uniprot/P05186 P05186]
 +
** [http://www.uniprot.org/uniprot/P09923 P09923]
 +
** [http://www.uniprot.org/uniprot/P15693 P15693]
 +
** [http://www.uniprot.org/uniprot/P10696 P10696]
 +
** [http://www.uniprot.org/uniprot/Q7M2K9 Q7M2K9]
 +
** [http://www.uniprot.org/uniprot/Q7M2K8 Q7M2K8]
 +
** [http://www.uniprot.org/uniprot/P51740 P51740]
 +
** [http://www.uniprot.org/uniprot/P19111 P19111]
 +
** [http://www.uniprot.org/uniprot/Q29486 Q29486]
 +
** [http://www.uniprot.org/uniprot/P11491 P11491]
 +
** [http://www.uniprot.org/uniprot/P72715 P72715]
 +
** [http://www.uniprot.org/uniprot/Q9ZP14 Q9ZP14]
 +
** [http://www.uniprot.org/uniprot/Q01343 Q01343]
 +
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=tubulin-tyrosine ligase}}
+
{{#set: common-name=alkaline phosphatase}}
−
{{#set: ec-number=ec-6.3.2.25}}
+
{{#set: ec-number=ec-3.1.3.1}}
−
{{#set: nb gene associated=13}}
+
{{#set: nb gene associated=5}}
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 14:28, 26 August 2019

Reaction ALKAPHOSPHA-RXN

  • direction:
    • left-to-right
  • common-name:
    • alkaline phosphatase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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