Difference between revisions of "RXN-13689"

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(Created page with "Category:reaction == Reaction RXN-12479 == * direction: ** left-to-right * common-name: ** adenosine4 in trnahis 2'-o-methyltransferase * ec-number: ** [http://enzyme.expa...")
(Created page with "Category:reaction == Reaction RXN-13689 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.1.3.8 ec-1.1.3.8] == Reaction formula == * 1 L-GU...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-12479 ==
+
== Reaction RXN-13689 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** adenosine4 in trnahis 2'-o-methyltransferase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.1.1.225 ec-2.1.1.225]
+
** [http://enzyme.expasy.org/EC/1.1.3.8 ec-1.1.3.8]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[His-tRNA-Adenosine4]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[His-tRNA-2-O-MeAdenosine4]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[L-GULONO-1-4-LACTONE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[ASCORBATE]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ07716]]
+
* Gene: [[SJ03315]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ03311]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6829]], tRNA methylation (yeast):
 
** '''11''' reactions found over '''15''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR116004
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R10053 R10053]
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=43197 43197]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32366 32366]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=adenosine4 in trnahis 2'-o-methyltransferase}}
+
{{#set: ec-number=ec-1.1.3.8}}
{{#set: ec-number=ec-2.1.1.225}}
+
{{#set: nb gene associated=2}}
{{#set: nb gene associated=1}}
+
{{#set: nb pathway associated=0}}
{{#set: nb pathway associated=1}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN-13689

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR116004
  • LIGAND-RXN:
  • RHEA: