Difference between revisions of "RXN-13697"

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(Created page with "Category:reaction == Reaction 3.1.3.57-RXN == * direction: ** left-to-right * common-name: ** inositol 1,4-bisphosphate 1-phosphatase * ec-number: ** [http://enzyme.expasy...")
(Created page with "Category:reaction == Reaction RXN-13697 == * direction: ** reversible * common-name: ** aspartate aminotransferase ** l-phenylalanine:2-oxoglutarate aminotransferase * ec-...")
 
(3 intermediate revisions by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3.1.3.57-RXN ==
+
== Reaction RXN-13697 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** inositol 1,4-bisphosphate 1-phosphatase
+
** aspartate aminotransferase
 +
** l-phenylalanine:2-oxoglutarate aminotransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.3.57 ec-3.1.3.57]
+
** [http://enzyme.expasy.org/EC/2.6.1.1 ec-2.6.1.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[INOSITOL-1-4-BISPHOSPHATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[D-MYO-INOSITOL-4-PHOSPHATE]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-ASPARTATE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[OXALACETIC_ACID]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ05836]]
+
* Gene: [[SJ04188]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ20943]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ07646]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ05778]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08678]]
 +
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6363]], D-myo-inositol (1,4,5)-trisphosphate degradation:
+
* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type:
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''9''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type:
 +
** '''10''' reactions found over '''14''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=reversible}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15554 15554]
+
{{#set: common-name=l-phenylalanine:2-oxoglutarate aminotransferase|aspartate aminotransferase}}
−
* LIGAND-RXN:
+
{{#set: ec-number=ec-2.6.1.1}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03393 R03393]
+
{{#set: nb gene associated=5}}
−
* UNIPROT:
+
{{#set: nb pathway associated=2}}
−
** [http://www.uniprot.org/uniprot/P21327 P21327]
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: direction=left-to-right}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: common-name=inositol 1,4-bisphosphate 1-phosphatase}}
 
−
{{#set: ec-number=ec-3.1.3.57}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=1}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-13697

  • direction:
    • reversible
  • common-name:
    • aspartate aminotransferase
    • l-phenylalanine:2-oxoglutarate aminotransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7115, C4 photosynthetic carbon assimilation cycle, NAD-ME type:
    • 9 reactions found over 11 reactions in the full pathway
  • PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type:
    • 10 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-13697&oldid=141369"