Difference between revisions of "RXN-13698"

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(Created page with "Category:reaction == Reaction RXN0-383 == * direction: ** left-to-right * common-name: ** nucleotide diphosphatase * ec-number: ** [http://enzyme.expasy.org/EC/3.6.1.9 ec-...")
(Created page with "Category:reaction == Reaction RXN-13698 == * direction: ** reversible * common-name: ** alanine transaminase * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.2 ec-2.6.1....")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN0-383 ==
+
== Reaction RXN-13698 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** nucleotide diphosphatase
+
** alanine transaminase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.6.1.9 ec-3.6.1.9]
+
** [http://enzyme.expasy.org/EC/2.6.1.2 ec-2.6.1.2]
−
** [http://enzyme.expasy.org/EC/3.6.1.65 ec-3.6.1.65]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CTP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[PYRUVATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ19809]]
−
* Gene: [[SJ19893]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ07337]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ06815]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ12166]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ19894]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ08856]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ08998]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ04934]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ22529]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type:
 +
** '''9''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type:
 +
** '''10''' reactions found over '''14''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=reversible}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27763 27763]
+
{{#set: common-name=alanine transaminase}}
−
* LIGAND-RXN:
+
{{#set: ec-number=ec-2.6.1.2}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00515 R00515]
+
{{#set: nb gene associated=2}}
−
{{#set: direction=left-to-right}}
+
{{#set: nb pathway associated=2}}
−
{{#set: common-name=nucleotide diphosphatase}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: ec-number=ec-3.6.1.65|ec-3.6.1.9}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
−
{{#set: nb gene associated=8}}
 
−
{{#set: nb pathway associated=0}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-13698

  • direction:
    • reversible
  • common-name:
    • alanine transaminase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7115, C4 photosynthetic carbon assimilation cycle, NAD-ME type:
    • 9 reactions found over 11 reactions in the full pathway
  • PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type:
    • 10 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-13698&oldid=141722"