Difference between revisions of "RXN-13709"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMPSYN-RXN AMPSYN-RXN] == * direction: ** reversible * common-name: ** adenylosuccinate lyase * ec-...")
 
(Created page with "Category:reaction == Reaction RXN-13709 == * direction: ** left-to-right * common-name: ** 4-methylsterol monooxygenase * ec-number: ** [http://enzyme.expasy.org/EC/1.14.1...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMPSYN-RXN AMPSYN-RXN] ==
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== Reaction RXN-13709 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** adenylosuccinate lyase
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** 4-methylsterol monooxygenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.3.2.2 ec-4.3.2.2]
+
** [http://enzyme.expasy.org/EC/1.14.18.9 ec-1.14.18.9]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ADENYLOSUCC]][c] '''<=>''' 1 [[AMP]][c] '''+''' 1 [[FUM]][c]
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* 1 [[4-METHYL-824-CHOLESTADIENOL]][c] '''+''' 6 [[FERROCYTOCHROME-B5]][c] '''+''' 3 [[OXYGEN-MOLECULE]][c] '''+''' 5 [[PROTON]][c] '''=>''' 1 [[CPD-4702]][c] '''+''' 6 [[FERRICYTOCHROME-B5]][c] '''+''' 4 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ06544]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7219]], adenosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7219 PWY-7219]
 
−
** '''4''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[manual]]; source: [[reactions_add_sjap]]; tool: [[curation]]; comment: curation sterols (girard et al.)
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR118260
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16856 16856]
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{{#set: direction=left-to-right}}
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* LIGAND-RXN:
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{{#set: common-name=4-methylsterol monooxygenase}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01083 R01083]
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{{#set: ec-number=ec-1.14.18.9}}
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* UNIPROT:
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{{#set: nb gene associated=0}}
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** [http://www.uniprot.org/uniprot/P21265 P21265]
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{{#set: nb pathway associated=0}}
−
** [http://www.uniprot.org/uniprot/Q58339 Q58339]
+
{{#set: reconstruction category=manual|gap-filling}}
−
** [http://www.uniprot.org/uniprot/Q9CF40 Q9CF40]
+
{{#set: reconstruction tool=curation|meneco}}
−
** [http://www.uniprot.org/uniprot/Q9PJ88 Q9PJ88]
+
{{#set: reconstruction comment=added for gapfilling|curation sterols (girard et al.)}}
−
** [http://www.uniprot.org/uniprot/Q9JSP3 Q9JSP3]
+
{{#set: reconstruction source=reactions_add_sjap|gapfilling_solution_with_meneco_draft_medium}}
−
** [http://www.uniprot.org/uniprot/P0AB89 P0AB89]
 
−
** [http://www.uniprot.org/uniprot/O65180 O65180]
 
−
** [http://www.uniprot.org/uniprot/P12047 P12047]
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=adenylosuccinate lyase}}
 
−
{{#set: ec-number=ec-4.3.2.2}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=1}}
 
−
{{#set: reconstruction category=orthology|annotation}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 

Latest revision as of 11:21, 18 March 2021

Reaction RXN-13709

  • direction:
    • left-to-right
  • common-name:
    • 4-methylsterol monooxygenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR118260





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