Difference between revisions of "RXN-13709"

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(Created page with "Category:reaction == Reaction RXN0-4222 == * direction: ** left-to-right * common-name: ** rnase bn exoribonuclease * ec-number: ** [http://enzyme.expasy.org/EC/3.1.13.1 e...")
(Created page with "Category:reaction == Reaction RXN-13709 == * direction: ** left-to-right * common-name: ** 4-methylsterol monooxygenase * ec-number: ** [http://enzyme.expasy.org/EC/1.14.1...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN0-4222 ==
+
== Reaction RXN-13709 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** rnase bn exoribonuclease
+
** 4-methylsterol monooxygenase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/3.1.13.1 ec-3.1.13.1]
+
** [http://enzyme.expasy.org/EC/1.14.18.9 ec-1.14.18.9]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD0-2351]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD0-2354]][c] '''+''' 1 [[Ribonucleoside-Monophosphates]][c]
+
* 1 [[4-METHYL-824-CHOLESTADIENOL]][c] '''+''' 6 [[FERROCYTOCHROME-B5]][c] '''+''' 3 [[OXYGEN-MOLECULE]][c] '''+''' 5 [[PROTON]][c] '''=>''' 1 [[CPD-4702]][c] '''+''' 6 [[FERRICYTOCHROME-B5]][c] '''+''' 4 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ19616]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY0-1479]], tRNA processing:
 
** '''4''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[reactions_add_sjap]]; tool: [[curation]]; comment: curation sterols (girard et al.)
 +
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR118260
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=rnase bn exoribonuclease}}
+
{{#set: common-name=4-methylsterol monooxygenase}}
{{#set: ec-number=ec-3.1.13.1}}
+
{{#set: ec-number=ec-1.14.18.9}}
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=0}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=manual|gap-filling}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=curation|meneco}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=added for gapfilling|curation sterols (girard et al.)}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=reactions_add_sjap|gapfilling_solution_with_meneco_draft_medium}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-13709

  • direction:
    • left-to-right
  • common-name:
    • 4-methylsterol monooxygenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR118260