Difference between revisions of "RXN-13908"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5410 PWY-5410] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-3193 tax-31...")
(Created page with "Category:reaction == Reaction RXN-11737 == * direction: ** reversible * common-name: ** cysteate aminotransferase ** l-phenylalanine:2-oxoglutarate aminotransferase * ec-n...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5410 PWY-5410] ==
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== Reaction RXN-11737 ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-3193 tax-3193]
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** reversible
 
* common-name:
 
* common-name:
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** traumatin and (z)-3-hexen-1-yl acetate biosynthesis
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** cysteate aminotransferase
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== Reaction(s) found ==
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** l-phenylalanine:2-oxoglutarate aminotransferase
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* [[LIPOXYGENASE-RXN]]
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* ec-number:
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* [[RXN-1321]]
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** [http://enzyme.expasy.org/EC/2.6.1.1 ec-2.6.1.1]
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== Reaction(s) not found ==
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== Reaction formula ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1347 RXN-1347]
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* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-CYSTEATE]][c] '''<=>''' 1 [[CPD-380]][c] '''+''' 1 [[GLT]][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1345 RXN-1345]
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== Gene(s) associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1349 RXN-1349]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1346 RXN-1346]
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* Gene: [[SJ08678]]
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* [http://metacyc.org/META/NEW-IMAGE?object=HYDROHEX-RXN HYDROHEX-RXN]
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** Category: [[orthology]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11852 RXN-11852]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12299 RXN-12299]
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* Gene: [[SJ07646]]
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{{#set: taxonomic-range=tax-3193}}
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** Category: [[annotation]]
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{{#set: common-name=traumatin and (z)-3-hexen-1-yl acetate biosynthesis}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: nb reaction found=2}}
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** Category: [[orthology]]
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{{#set: completion rate=0.22}}
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: nb total reaction=9}}
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ20943]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ04188]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ05778]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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</div>
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== Pathway(s)  ==
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* [[PWY-6638]], sulfolactate degradation III:
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6642]], (R)-cysteate degradation:
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6643]], coenzyme M biosynthesis II:
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** '''1''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R02433 R02433]
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{{#set: direction=reversible}}
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{{#set: common-name=l-phenylalanine:2-oxoglutarate aminotransferase|cysteate aminotransferase}}
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{{#set: ec-number=ec-2.6.1.1}}
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{{#set: nb gene associated=5}}
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{{#set: nb pathway associated=3}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana}}

Revision as of 20:45, 18 December 2020

Reaction RXN-11737

  • direction:
    • reversible
  • common-name:
    • cysteate aminotransferase
    • l-phenylalanine:2-oxoglutarate aminotransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6638, sulfolactate degradation III:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6642, (R)-cysteate degradation:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6643, coenzyme M biosynthesis II:
    • 1 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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