Difference between revisions of "RXN-13927"

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(Created page with "Category:reaction == Reaction FERREDOXIN--NITRITE-REDUCTASE-RXN == * direction: ** left-to-right * common-name: ** ferredoxin--nitrite reductase * ec-number: ** [http://en...")
(Created page with "Category:reaction == Reaction RXN-13927 == * direction: ** reversible * common-name: ** l-2-hydroxycarboxylate dehydrogenase (nad+) * ec-number: ** [http://enzyme.expasy.o...")
 
(5 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction FERREDOXIN--NITRITE-REDUCTASE-RXN ==
+
== Reaction RXN-13927 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** ferredoxin--nitrite reductase
+
** l-2-hydroxycarboxylate dehydrogenase (nad+)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.7.7.1 ec-1.7.7.1]
+
** [http://enzyme.expasy.org/EC/1.1.1.337 ec-1.1.1.337]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NITRITE]][c] '''+''' 8 [[PROTON]][c] '''+''' 6 [[Reduced-ferredoxins]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 6 [[Oxidized-ferredoxins]][c] '''+''' 2 [[WATER]][c]
+
* 1 [[L-2-hydroxyacids]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[2-Oxo-carboxylates]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ00909]]
+
* Gene: [[SJ06713]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY490-3]], nitrate reduction VI (assimilatory):
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-381]], nitrate reduction II (assimilatory):
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR113554
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R10189 R10189]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18043 18043]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34558 34558]
−
* LIGAND-RXN:
+
{{#set: direction=reversible}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00790 R00790]
+
{{#set: common-name=l-2-hydroxycarboxylate dehydrogenase (nad+)}}
−
{{#set: direction=left-to-right}}
+
{{#set: ec-number=ec-1.1.1.337}}
−
{{#set: common-name=ferredoxin--nitrite reductase}}
 
−
{{#set: ec-number=ec-1.7.7.1}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-13927

  • direction:
    • reversible
  • common-name:
    • l-2-hydroxycarboxylate dehydrogenase (nad+)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR113554
  • LIGAND-RXN:
  • RHEA:





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