Difference between revisions of "RXN-14014"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10814 RXN-10814] == * direction: ** reversible * common-name: ** l-phenylalanine aminotransfera...")
(Created page with "Category:reaction == Reaction RXN-14014 == * direction: ** left-to-right * common-name: ** 4-hydroxy-tetrahydrodipicolinate reductase * ec-number: ** [http://enzyme.expasy...")
 
(8 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10814 RXN-10814] ==
+
== Reaction RXN-14014 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** l-phenylalanine aminotransferase
+
** 4-hydroxy-tetrahydrodipicolinate reductase
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** l-phenylalanine:2-oxoglutarate aminotransferase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.1 ec-2.6.1.1]
+
** [http://enzyme.expasy.org/EC/1.17.1.8 ec-1.17.1.8]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[PHE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[PHENYL-PYRUVATE]][c]
+
* 1 [[CPD-14443]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[DELTA1-PIPERIDEINE-2-6-DICARBOXYLATE]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ08678]]
+
* Gene: [[SJ17695]]
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ20943]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ04188]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ05778]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ07646]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6318]], L-phenylalanine degradation IV (mammalian, via side chain): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6318 PWY-6318]
+
* [[PWY-2941]], L-lysine biosynthesis II:
−
** '''4''' reactions found over '''9''' reactions in the full pathway
+
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I:
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5097]], L-lysine biosynthesis VI:
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-2942]], L-lysine biosynthesis III:
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR108728
−
* UNIPROT:
+
* RHEA:
−
** [http://www.uniprot.org/uniprot/P04693 P04693]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=35333 35333]
−
** [http://www.uniprot.org/uniprot/P74861 P74861]
 
−
** [http://www.uniprot.org/uniprot/Q9UWK8 Q9UWK8]
 
−
** [http://www.uniprot.org/uniprot/Q9UWK9 Q9UWK9]
 
−
** [http://www.uniprot.org/uniprot/P95468 P95468]
 
−
** [http://www.uniprot.org/uniprot/Q9JYA1 Q9JYA1]
 
−
** [http://www.uniprot.org/uniprot/Q9JT83 Q9JT83]
 
−
** [http://www.uniprot.org/uniprot/Q9UZ63 Q9UZ63]
 
−
** [http://www.uniprot.org/uniprot/O58489 O58489]
 
−
** [http://www.uniprot.org/uniprot/O59096 O59096]
 
−
** [http://www.uniprot.org/uniprot/Q9PHA8 Q9PHA8]
 
−
** [http://www.uniprot.org/uniprot/Q9V0L2 Q9V0L2]
 
−
** [http://www.uniprot.org/uniprot/Q9Z7G5 Q9Z7G5]
 
−
** [http://www.uniprot.org/uniprot/Q02636 Q02636]
 
−
** [http://www.uniprot.org/uniprot/O84642 O84642]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00694 R00694]
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** [http://www.genome.jp/dbget-bin/www_bget?R04199 R04199]
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* RHEA:
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{{#set: direction=left-to-right}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25155 25155]
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{{#set: common-name=4-hydroxy-tetrahydrodipicolinate reductase}}
−
</div>
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{{#set: ec-number=ec-1.17.1.8}}
−
{{#set: direction=reversible}}
+
{{#set: nb gene associated=1}}
−
{{#set: common-name=l-phenylalanine:2-oxoglutarate aminotransferase|l-phenylalanine aminotransferase}}
+
{{#set: nb pathway associated=4}}
−
{{#set: ec-number=ec-2.6.1.1}}
 
−
{{#set: nb gene associated=5}}
 
−
{{#set: nb pathway associated=1}}
 
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-14014

  • direction:
    • left-to-right
  • common-name:
    • 4-hydroxy-tetrahydrodipicolinate reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-2941, L-lysine biosynthesis II:
    • 6 reactions found over 9 reactions in the full pathway
  • DAPLYSINESYN-PWY, L-lysine biosynthesis I:
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-5097, L-lysine biosynthesis VI:
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-2942, L-lysine biosynthesis III:
    • 6 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR108728
  • RHEA:
  • LIGAND-RXN:





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