Difference between revisions of "RXN-14023"

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(Created page with "Category:reaction == Reaction 3.2.1.38-RXN == * direction: ** left-to-right * common-name: ** beta-d-fucosidase * ec-number: ** [http://enzyme.expasy.org/EC/3.2.1.38 ec-3....")
(Created page with "Category:reaction == Reaction RXN-12440 == * direction: ** left-to-right * common-name: ** l-ascorbate peroxidase * ec-number: ** [http://enzyme.expasy.org/EC/1.11.1.11 ec...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3.2.1.38-RXN ==
+
== Reaction RXN-12440 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** beta-d-fucosidase
+
** l-ascorbate peroxidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.2.1.38 ec-3.2.1.38]
+
** [http://enzyme.expasy.org/EC/1.11.1.11 ec-1.11.1.11]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Beta-D-fucosides]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-13293]][c] '''+''' 1 [[Non-Fucosylated-Fucose-Acceptors]][c]
+
* 2 [[ASCORBATE]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[ASCORBATE]][c] '''+''' 1 [[L-DEHYDRO-ASCORBATE]][c] '''+''' 2 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ04558]]
+
* Gene: [[SJ14435]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ16420]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ04585]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ17253]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6959]], L-ascorbate degradation V:
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6960]], L-ascorbate degradation III:
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6961]], L-ascorbate degradation II (bacterial, aerobic):
 +
** '''1''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
* METANETX-RXN : MNXR140261
−
** [http://www.uniprot.org/uniprot/P94248 P94248]
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22997 22997]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=beta-d-fucosidase}}
+
{{#set: common-name=l-ascorbate peroxidase}}
−
{{#set: ec-number=ec-3.2.1.38}}
+
{{#set: ec-number=ec-1.11.1.11}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=4}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 08:38, 15 March 2021

Reaction RXN-12440

  • direction:
    • left-to-right
  • common-name:
    • l-ascorbate peroxidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6959, L-ascorbate degradation V:
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6960, L-ascorbate degradation III:
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-6961, L-ascorbate degradation II (bacterial, aerobic):
    • 1 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR140261
  • RHEA:





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