Difference between revisions of "RXN-14029"

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(Created page with "Category:reaction == Reaction RXN-9951 == <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> * direction: ** reversible * common-name:...")
(Created page with "Category:reaction == Reaction ATDCDm == * direction: ** left-to-right * common-name: ** atp:dcdp phosphotransferase, mitochondria == Reaction formula == * 1.0 ATP[m] '...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN-9951 ==
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== Reaction ATDCDm ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* direction:
 
* direction:
−
** reversible
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** left-to-right
 
* common-name:
 
* common-name:
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** isocitrate dehydrogenase (nadp+)
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** atp:dcdp phosphotransferase, mitochondria
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** nadp-dependent isocitrate dehydrogenase
 
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* synonymous:
 
−
** idp1
 
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** oxalosuccinate decarboxylase
 
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** oxalsuccinic decarboxylase
 
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** idp
 
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** idp2
 
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** isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase
 
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** nadp-linked isocitrate dehydrogenase
 
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** nadp-specific isocitrate dehydrogenase
 
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** idh (ambiguous)
 
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** isocitrate dehydrogenase (nadp-dependent)
 
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** nadp+-icdh
 
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** nadp+-linked isocitrate dehydrogenase
 
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** triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase
 
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** nadp-dependent isocitric dehydrogenase
 
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** nadp+-idh
 
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** isocitrate (nadp) dehydrogenase
 
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** nadp isocitric dehydrogenase
 
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** idp3
 
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** dual-cofactor-specific isocitrate dehydrogenase
 
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</div>
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[NADP]][c] '''+''' 1 [[THREO-DS-ISO-CITRATE]][c] '''<=>''' 1 [[NADPH]][c] '''+''' 1 [[OXALO-SUCCINATE]][c] '''+''' 1 [[PROTON]][c]
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* 1.0 [[ATP]][m] '''+''' 1.0 [[DCDP]][m] '''=>''' 1.0 [[ADP]][m] '''+''' 1.0 [[DCTP]][m]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ08749]]
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* Gene: [[SJ10125]]
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: direction=left-to-right}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25591 25591]
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{{#set: common-name=atp:dcdp phosphotransferase, mitochondria}}
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R01899 R01899]
 
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{{#set: direction=reversible}}
 
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{{#set: common-name=isocitrate dehydrogenase (nadp+)|nadp-dependent isocitrate dehydrogenase}}
 
−
{{#set: synonymous=nadp-linked isocitrate dehydrogenase|nadp-dependent isocitric dehydrogenase|idp2|oxalosuccinate decarboxylase|nadp+-idh|idh (ambiguous)|oxalsuccinic decarboxylase|isocitrate (nadp) dehydrogenase|idp3|isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase|nadp-specific isocitrate dehydrogenase|idp|nadp isocitric dehydrogenase|idp1|nadp+-linked isocitrate dehydrogenase|triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase|nadp+-icdh|isocitrate dehydrogenase (nadp-dependent)|dual-cofactor-specific isocitrate dehydrogenase}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 19:01, 14 January 2021

Reaction ATDCDm

  • direction:
    • left-to-right
  • common-name:
    • atp:dcdp phosphotransferase, mitochondria

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-14029&oldid=101792"