Difference between revisions of "RXN-1404"
Jump to navigation
Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11734 RXN-11734] == * direction: ** reversible * common-name: ** medium-chain acyl-coa dehydrog...") |
(Created page with "Category:reaction == Reaction RXN-1404 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.5.5.1 ec-3.5.5.1] == Reaction formula == * 1 INDOL...") |
||
| (8 intermediate revisions by 4 users not shown) | |||
| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction RXN-1404 == |
* direction: | * direction: | ||
| − | ** | + | ** left-to-right |
| − | |||
| − | |||
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/3.5.5.1 ec-3.5.5.1] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[INDOLEYL-CPD]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[INDOLE_ACETATE_AUXIN]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ02846]] |
| − | ** Category: [[ | + | ** Category: [[orthology]] |
| − | *** Source: [[ | + | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | * Gene: [[SJ14362]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[PWY-581]], indole-3-acetate biosynthesis II: | ||
| + | ** '''5''' reactions found over '''12''' reactions in the full pathway | ||
| + | * [[PWYQT-4476]], indole glucosinolate activation (herbivore attack): | ||
| + | ** '''1''' reactions found over '''13''' reactions in the full pathway | ||
| + | * [[PWY-5026]], indole-3-acetate biosynthesis V (bacteria and fungi): | ||
| + | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * category: [[ | + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| + | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
| − | + | * METANETX-RXN : MNXR102070 | |
| − | {{#set: | + | * RHEA: |
| − | {{#set: ec-number=ec- | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=45777 45777] |
| − | {{#set: nb gene associated= | + | * LIGAND-RXN: |
| − | {{#set: nb pathway associated= | + | ** [http://www.genome.jp/dbget-bin/www_bget?R03093 R03093] |
| − | {{#set: reconstruction category= | + | {{#set: direction=left-to-right}} |
| − | {{#set: reconstruction tool= | + | {{#set: ec-number=ec-3.5.5.1}} |
| + | {{#set: nb gene associated=2}} | ||
| + | {{#set: nb pathway associated=3}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}} |
Latest revision as of 11:18, 18 March 2021
Contents
Reaction RXN-1404
- direction:
- left-to-right
- ec-number:
Reaction formula
- 1 INDOLEYL-CPD[c] + 2 WATER[c] => 1 AMMONIUM[c] + 1 INDOLE_ACETATE_AUXIN[c]
Gene(s) associated with this reaction
- Gene: SJ02846
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ14362
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- PWY-581, indole-3-acetate biosynthesis II:
- 5 reactions found over 12 reactions in the full pathway
- PWYQT-4476, indole glucosinolate activation (herbivore attack):
- 1 reactions found over 13 reactions in the full pathway
- PWY-5026, indole-3-acetate biosynthesis V (bacteria and fungi):
- 1 reactions found over 1 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
External links
