Difference between revisions of "RXN-14048"

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(Created page with "Category:reaction == Reaction RXN-10911 == * direction: ** left-to-right * common-name: ** 3,4-dihydroxyphenylglycolaldehyde reductase ** alcohol dehydrogenase (nad) * ec-...")
(Created page with "Category:reaction == Reaction RXN-14048 == * direction: ** left-to-right * common-name: ** cystathionine γ-lyase ** cystathionine gamma-lyase == Reaction formula ==...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-10911 ==
+
== Reaction RXN-14048 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 3,4-dihydroxyphenylglycolaldehyde reductase
+
** cystathionine γ-lyase
−
** alcohol dehydrogenase (nad)
+
** cystathionine gamma-lyase
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/1.1.1.1 ec-1.1.1.1]
 
−
* synonymous:
 
−
** 3,4-dihydroxyphenylglycol dehydrogenase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DIHYDROXYPHENYLGLYCOLALDEHYDE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-11878]][c] '''+''' 1 [[NAD]][c]
+
* 1 [[L-CYSTATHIONINE]][c] '''=>''' 1 [[CPD-15056]][c] '''+''' 1 [[CYS]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ14768]]
+
* Gene: [[SJ05358]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ07759]]
+
* Gene: [[SJ05357]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ21601]]
+
* Gene: [[SJ20026]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6342]], noradrenaline and adrenaline degradation:
+
* [[HOMOCYSDEGR-PWY]], L-cysteine biosynthesis III (from L-homocysteine):
−
** '''8''' reactions found over '''13''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR112152
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R08632 R08632]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31149 31149]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24913 24913]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04880 R04880]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=3,4-dihydroxyphenylglycolaldehyde reductase|alcohol dehydrogenase (nad)}}
+
{{#set: common-name=cystathionine gamma-lyase|cystathionine γ-lyase}}
−
{{#set: ec-number=ec-1.1.1.1}}
 
−
{{#set: synonymous=3,4-dihydroxyphenylglycol dehydrogenase}}
 
 
{{#set: nb gene associated=3}}
 
{{#set: nb gene associated=3}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN-14048

  • direction:
    • left-to-right
  • common-name:
    • cystathionine γ-lyase
    • cystathionine gamma-lyase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • HOMOCYSDEGR-PWY, L-cysteine biosynthesis III (from L-homocysteine):
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR112152
  • LIGAND-RXN:
  • RHEA:





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