Difference between revisions of "RXN-14107"

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(Created page with "Category:reaction == Reaction KETOISOCAPROATE-RXN == * direction: ** left-to-right * common-name: ** 4-methyl-2-oxopentanoate dehydrogenase (lipoamide) * ec-number: ** [ht...")
(Created page with "Category:reaction == Reaction RXN-14107 == * direction: ** left-to-right * common-name: ** menaquinol-cytochrome c reductase ** ubiquinol-cytochrome-c reductase * ec-numbe...")
 
(6 intermediate revisions by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction KETOISOCAPROATE-RXN ==
+
== Reaction RXN-14107 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 4-methyl-2-oxopentanoate dehydrogenase (lipoamide)
+
** menaquinol-cytochrome c reductase
 +
** ubiquinol-cytochrome-c reductase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.2.4.4 ec-1.2.4.4]
+
** [http://enzyme.expasy.org/EC/1.10.2.2 ec-1.10.2.2]
 +
* synonymous:
 +
** menaquinone:cytochrome c reductase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[BCAA-dehydrogenase-lipoyl]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[BCAA-dehydrogenase-3MB-DH-lipoyl]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* 2 [[Cytochromes-C-Oxidized]][e] '''+''' 1 [[Menaquinols]][c] '''=>''' 2 [[Cytochromes-C-Reduced]][e] '''+''' 1 [[Menaquinones]][c] '''+''' 2 [[PROTON]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ11017]]
+
* Gene: [[SJ13715]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ18449]]
+
* Gene: [[SJ03106]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ16637]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
Line 23: Line 29:
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR143917
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P21839 P21839]
 
−
** [http://www.uniprot.org/uniprot/P21953 P21953]
 
−
** [http://www.uniprot.org/uniprot/P37940 P37940]
 
−
** [http://www.uniprot.org/uniprot/Q9PK54 Q9PK54]
 
−
** [http://www.uniprot.org/uniprot/P37941 P37941]
 
−
** [http://www.uniprot.org/uniprot/P11178 P11178]
 
−
** [http://www.uniprot.org/uniprot/P12694 P12694]
 
−
** [http://www.uniprot.org/uniprot/P09061 P09061]
 
−
** [http://www.uniprot.org/uniprot/P09060 P09060]
 
−
** [http://www.uniprot.org/uniprot/P11960 P11960]
 
−
** [http://www.uniprot.org/uniprot/O84344 O84344]
 
−
** [http://www.uniprot.org/uniprot/Q9Z9E8 Q9Z9E8]
 
−
** [http://www.uniprot.org/uniprot/Q9I1M2 Q9I1M2]
 
−
** [http://www.uniprot.org/uniprot/P35738 P35738]
 
−
** [http://www.uniprot.org/uniprot/P50136 P50136]
 
−
** [http://www.uniprot.org/uniprot/O48615 O48615]
 
−
** [http://www.uniprot.org/uniprot/O03849 O03849]
 
−
** [http://www.uniprot.org/uniprot/Q53592 Q53592]
 
−
** [http://www.uniprot.org/uniprot/Q53593 Q53593]
 
−
** [http://www.uniprot.org/uniprot/O82450 O82450]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=4-methyl-2-oxopentanoate dehydrogenase (lipoamide)}}
+
{{#set: common-name=menaquinol-cytochrome c reductase|ubiquinol-cytochrome-c reductase}}
−
{{#set: ec-number=ec-1.2.4.4}}
+
{{#set: ec-number=ec-1.10.2.2}}
−
{{#set: nb gene associated=2}}
+
{{#set: synonymous=menaquinone:cytochrome c reductase}}
 +
{{#set: nb gene associated=3}}
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:22, 18 March 2021

Reaction RXN-14107

  • direction:
    • left-to-right
  • common-name:
    • menaquinol-cytochrome c reductase
    • ubiquinol-cytochrome-c reductase
  • ec-number:
  • synonymous:
    • menaquinone:cytochrome c reductase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR143917






Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-14107&oldid=141961"