Difference between revisions of "RXN-14116"

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(Created page with "Category:reaction == Reaction TRYPTOPHAN-2-MONOOXYGENASE-RXN == * direction: ** left-to-right * common-name: ** tryptophan 2-monooxygenase * ec-number: ** [http://enzyme.e...")
(Created page with "Category:reaction == Reaction RXN-14116 == * direction: ** left-to-right * common-name: ** 1-pyrroline-5-carboxylate dehydrogenase * ec-number: ** [http://enzyme.expasy.or...")
 
(2 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction TRYPTOPHAN-2-MONOOXYGENASE-RXN ==
+
== Reaction RXN-14116 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** tryptophan 2-monooxygenase
+
** 1-pyrroline-5-carboxylate dehydrogenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.13.12.3 ec-1.13.12.3]
+
** [http://enzyme.expasy.org/EC/1.2.1.88 ec-1.2.1.88]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[TRP]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-237]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GLT]][c] '''+''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ21941]]
+
* Gene: [[SJ10107]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ13707]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-3161]], indole-3-acetate biosynthesis III (bacteria):
+
* [[ARGASEDEG-PWY]], L-arginine degradation I (arginase pathway):
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6853]], ethene biosynthesis II (microbes):
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PROUT-PWY]], L-proline degradation I:
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR103352
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00245 R00245]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16166 16166]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30236 30236]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00679 R00679]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P06617 P06617]
 
−
** [http://www.uniprot.org/uniprot/Q52367 Q52367]
 
−
** [http://www.uniprot.org/uniprot/Q09109 Q09109]
 
−
** [http://www.uniprot.org/uniprot/P0A3V3 P0A3V3]
 
−
** [http://www.uniprot.org/uniprot/P0A3V2 P0A3V2]
 
−
** [http://www.uniprot.org/uniprot/Q04564 Q04564]
 
−
** [http://www.uniprot.org/uniprot/Q44520 Q44520]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=tryptophan 2-monooxygenase}}
+
{{#set: common-name=1-pyrroline-5-carboxylate dehydrogenase}}
−
{{#set: ec-number=ec-1.13.12.3}}
+
{{#set: ec-number=ec-1.2.1.88}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=3}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction RXN-14116

  • direction:
    • left-to-right
  • common-name:
    • 1-pyrroline-5-carboxylate dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • ARGASEDEG-PWY, L-arginine degradation I (arginase pathway):
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6853, ethene biosynthesis II (microbes):
    • 1 reactions found over 5 reactions in the full pathway
  • PROUT-PWY, L-proline degradation I:
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR103352
  • LIGAND-RXN:
  • RHEA:





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