Difference between revisions of "RXN-14148"

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(Created page with "Category:reaction == Reaction RXN-10821 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.192 ec-2.3.1.192] == Reaction formula == * 1 ...")
(Created page with "Category:reaction == Reaction RXN1F-150 == * direction: ** left-to-right * common-name: ** lycopene β-cyclase * ec-number: ** [http://enzyme.expasy.org/EC/5.5.1.19 ec...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-10821 ==
+
== Reaction RXN1F-150 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** lycopene β-cyclase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.192 ec-2.3.1.192]
+
** [http://enzyme.expasy.org/EC/5.5.1.19 ec-5.5.1.19]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-207]][c] '''+''' 1 [[GLY]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[CPD-11715]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD1F-114]][c] '''=>''' 1 [[CPD1F-126]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15041]]
+
* Gene: [[SJ04962]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6318]], L-phenylalanine degradation IV (mammalian, via side chain):
+
* [[PWY-7591]], okenone biosynthesis:
−
** '''4''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7938]], isorenieratene biosynthesis I (actinobacteria):
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7939]], chlorobactene biosynthesis:
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5943]], β-carotene biosynthesis:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27851 27851]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32222 32222]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05841 R05841]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05341 R05341]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-2.3.1.192}}
+
{{#set: common-name=lycopene β-cyclase}}
 +
{{#set: ec-number=ec-5.5.1.19}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=4}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:38, 5 January 2021

Reaction RXN1F-150

  • direction:
    • left-to-right
  • common-name:
    • lycopene β-cyclase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7591, okenone biosynthesis:
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-7938, isorenieratene biosynthesis I (actinobacteria):
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7939, chlorobactene biosynthesis:
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5943, β-carotene biosynthesis:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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