Difference between revisions of "RXN-14195"

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(Created page with "Category:reaction == Reaction TRNA-URACIL-5--METHYLTRANSFERASE-RXN == * direction: ** left-to-right * common-name: ** trna(m5u54)methyltransferase * ec-number: ** [http://...")
(Created page with "Category:reaction == Reaction RXN-14195 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.6.1.5 ec-3.6.1.5] == Reaction formula == * 1 DATP...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction TRNA-URACIL-5--METHYLTRANSFERASE-RXN ==
+
== Reaction RXN-14195 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** trna(m5u54)methyltransferase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.35 ec-2.1.1.35]
+
** [http://enzyme.expasy.org/EC/3.6.1.5 ec-3.6.1.5]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[Uracil-54-in-tRNA]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[tRNA-containing-5Me-uridine54]][c]
+
* 1 [[DATP]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[DAMP]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03220]]
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* Gene: [[SJ16444]]
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** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR118560
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=42713 42713]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00594 R00594]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P23003 P23003]
 
−
** [http://www.uniprot.org/uniprot/P31812 P31812]
 
−
** [http://www.uniprot.org/uniprot/Q9PP92 Q9PP92]
 
−
** [http://www.uniprot.org/uniprot/Q9JT82 Q9JT82]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=trna(m5u54)methyltransferase}}
+
{{#set: ec-number=ec-3.6.1.5}}
−
{{#set: ec-number=ec-2.1.1.35}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Latest revision as of 11:20, 18 March 2021

Reaction RXN-14195

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR118560





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