Difference between revisions of "RXN-14196"

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(Created page with "Category:reaction == Reaction ORNITHINE-CYCLODEAMINASE-RXN == * direction: ** left-to-right * common-name: ** ornithine cyclodeaminase * ec-number: ** [http://enzyme.expas...")
(Created page with "Category:reaction == Reaction 2.7.8.27-RXN == * direction: ** reversible * common-name: ** sphingomyelin synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.8.27 ec-...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ORNITHINE-CYCLODEAMINASE-RXN ==
+
== Reaction 2.7.8.27-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** ornithine cyclodeaminase
+
** sphingomyelin synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.3.1.12 ec-4.3.1.12]
+
** [http://enzyme.expasy.org/EC/2.7.8.27 ec-2.7.8.27]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[L-ORNITHINE]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[PRO]][c]
+
* 1 [[Ceramides]][c] '''+''' 1 [[PHOSPHATIDYLCHOLINE]][c] '''<=>''' 1 [[DIACYLGLYCEROL]][c] '''+''' 1 [[Sphingomyelins]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ10037]]
+
* Gene: [[SJ20972]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[ARG-GLU-PWY]], L-arginine degradation VII (arginase 3 pathway):
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[ORN-AMINOPENTANOATE-CAT-PWY]], L-ornithine degradation I (L-proline biosynthesis):
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24369 24369]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18768 18768]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00671 R00671]
+
** [http://www.genome.jp/dbget-bin/www_bget?R08969 R08969]
−
* UNIPROT:
+
{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/Q59701 Q59701]
+
{{#set: common-name=sphingomyelin synthase}}
−
** [http://www.uniprot.org/uniprot/P09773 P09773]
+
{{#set: ec-number=ec-2.7.8.27}}
−
** [http://www.uniprot.org/uniprot/P33728 P33728]
 
−
** [http://www.uniprot.org/uniprot/O68052 O68052]
 
−
** [http://www.uniprot.org/uniprot/Q9WWA2 Q9WWA2]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=ornithine cyclodeaminase}}
 
−
{{#set: ec-number=ec-4.3.1.12}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 11:26, 15 January 2021

Reaction 2.7.8.27-RXN

  • direction:
    • reversible
  • common-name:
    • sphingomyelin synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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