Difference between revisions of "RXN-14205"

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(Created page with "Category:reaction == Reaction TRANS-RXN0-623 == * direction: ** left-to-right * common-name: ** long-chain fatty acid-coa ligase ** fatty acyl-coa synthetase (transporting...")
(Created page with "Category:reaction == Reaction ExchangeSeed-NA+ == * direction: ** reversible == Reaction formula == * 1.0 NA+[C-BOUNDARY] '''<=>''' 1.0 NA+[e] == Gene(s) associate...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction TRANS-RXN0-623 ==
+
== Reaction ExchangeSeed-NA+ ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
* common-name:
 
** long-chain fatty acid-coa ligase
 
** fatty acyl-coa synthetase (transporting)
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD66-39]][e] '''+''' 1 [[PROTON]][e] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c]
+
* 1.0 [[NA+]][C-BOUNDARY] '''<=>''' 1.0 [[NA+]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* Gene: [[SJ13972]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ05591]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ08690]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ08692]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ03650]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ08691]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
{{#set: direction=left-to-right}}
+
{{#set: direction=reversible}}
{{#set: common-name=fatty acyl-coa synthetase (transporting)|long-chain fatty acid-coa ligase}}
+
{{#set: nb gene associated=0}}
{{#set: ec-number=ec-6.2.1.3}}
 
{{#set: nb gene associated=6}}
 
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=import_from_medium}}

Revision as of 11:21, 15 January 2021

Reaction ExchangeSeed-NA+

  • direction:
    • reversible

Reaction formula

  • 1.0 NA+[C-BOUNDARY] <=> 1.0 NA+[e]

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links