Difference between revisions of "RXN-14205"

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(Created page with "Category:reaction == Reaction RXN-14326 == * direction: ** left-to-right * common-name: ** diphthine synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.98 ec-2.1....")
(Created page with "Category:reaction == Reaction SPHINGOMYELIN-PHOSPHODIESTERASE-RXN == * direction: ** left-to-right * common-name: ** sphingomyelin phosphodiesterase * ec-number: ** [http:...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-14326 ==
+
== Reaction SPHINGOMYELIN-PHOSPHODIESTERASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** diphthine synthase
+
** sphingomyelin phosphodiesterase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.98 ec-2.1.1.98]
+
** [http://enzyme.expasy.org/EC/3.1.4.12 ec-3.1.4.12]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-3-CARBOXY-3-AMINOPROPYL-L-HISTIDINE]][c] '''+''' 3 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 3 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[DIPHTINE]][c] '''+''' 3 [[PROTON]][c]
+
* 1 [[Sphingomyelins]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Ceramides]][c] '''+''' 1 [[PHOSPHORYL-CHOLINE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ08595]]
+
* Gene: [[SJ16608]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ16609]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6482]], diphthamide biosynthesis I (archaea):
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=36416 36416]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19254 19254]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R10306 R10306]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02541 R02541]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P17405 P17405]
 +
** [http://www.uniprot.org/uniprot/P11889 P11889]
 +
** [http://www.uniprot.org/uniprot/P09599 P09599]
 +
** [http://www.uniprot.org/uniprot/P17627 P17627]
 +
** [http://www.uniprot.org/uniprot/Q04519 Q04519]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=diphthine synthase}}
+
{{#set: common-name=sphingomyelin phosphodiesterase}}
−
{{#set: ec-number=ec-2.1.1.98}}
+
{{#set: ec-number=ec-3.1.4.12}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:15, 14 January 2021

Reaction SPHINGOMYELIN-PHOSPHODIESTERASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • sphingomyelin phosphodiesterase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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