Difference between revisions of "RXN-14227"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10815 RXN-10815] == * direction: ** left-to-right * common-name: ** 2-oxo-3-phenylpropanoate di...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AKGCITtm AKGCITtm] == * direction: ** reversible * common-name: ** dicarboxylate/tricarboxylate car...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10815 RXN-10815] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AKGCITtm AKGCITtm] ==
 
* direction:
 
* direction:
** left-to-right
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** reversible
 
* common-name:
 
* common-name:
** 2-oxo-3-phenylpropanoate dioxygenase
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** dicarboxylate/tricarboxylate carrier (akg:cit), mitochondrial
** phenylpyruvate dioxygenase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/1.13.11.27 ec-1.13.11.27]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PHENYL-PYRUVATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-11495]][c]
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* 1.0 [[2-KETOGLUTARATE]][c] '''+''' 1.0 [[CIT]][m] '''<=>''' 1.0 [[2-KETOGLUTARATE]][m] '''+''' 1.0 [[CIT]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ08953]]
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* Gene: [[SJ18185]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ08954]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6318]], L-phenylalanine degradation IV (mammalian, via side chain): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6318 PWY-6318]
 
** '''4''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: direction=reversible}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31108 31108]
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{{#set: common-name=dicarboxylate/tricarboxylate carrier (akg:cit), mitochondrial}}
* LIGAND-RXN:
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{{#set: nb gene associated=1}}
** [http://www.genome.jp/dbget-bin/www_bget?R01372 R01372]
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{{#set: nb pathway associated=0}}
{{#set: direction=left-to-right}}
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{{#set: reconstruction category=orthology}}
{{#set: common-name=phenylpyruvate dioxygenase|2-oxo-3-phenylpropanoate dioxygenase}}
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{{#set: reconstruction tool=pantograph}}
{{#set: ec-number=ec-1.13.11.27}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
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{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 09:31, 27 August 2019

Reaction AKGCITtm

  • direction:
    • reversible
  • common-name:
    • dicarboxylate/tricarboxylate carrier (akg:cit), mitochondrial

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links