Difference between revisions of "RXN-14266"

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(Created page with "Category:reaction == Reaction RXN-7784 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.219 ec-1.1.1.219] == Reaction formula == * 1 C...")
(Created page with "Category:reaction == Reaction RXN-9104 == * direction: ** left-to-right * common-name: ** 1,4-beta-d-xylan synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2.24 e...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-7784 ==
+
== Reaction RXN-9104 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** 1,4-beta-d-xylan synthase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.1.1.219 ec-1.1.1.219]
+
** [http://enzyme.expasy.org/EC/2.4.2.24 ec-2.4.2.24]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-7087]][c] '''+''' 1 [[NADPH]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CPD-7088]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[1-4-beta-Xylan]][c] '''+''' 1 [[UDP-D-XYLOSE]][c] '''=>''' 1 [[1-4-beta-Xylan]][c] '''+''' 1 [[UDP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ21972]]
+
* Gene: [[SJ22094]]
** Category: [[orthology]]
+
** Category: [[annotation]]
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
* Gene: [[SJ12213]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ06064]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5152]], leucodelphinidin biosynthesis:
+
* [[PWY-5800]], xylan biosynthesis:
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR122647
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15290 15290]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R05038 R05038]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03928 R03928]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: ec-number=ec-1.1.1.219}}
+
{{#set: common-name=1,4-beta-d-xylan synthase}}
{{#set: nb gene associated=3}}
+
{{#set: ec-number=ec-2.4.2.24}}
 +
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 08:35, 15 March 2021

Reaction RXN-9104

  • direction:
    • left-to-right
  • common-name:
    • 1,4-beta-d-xylan synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5800, xylan biosynthesis:
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR122647
  • RHEA:
  • LIGAND-RXN: