Difference between revisions of "RXN-14266"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOACYLCOATHIOL-RXN KETOACYLCOATHIOL-RXN] == * direction: ** left-to-right * common-name: ** acety...")
(Created page with "Category:reaction == Reaction RXN-14266 == * direction: ** reversible * common-name: ** 3-hydroxyisovaleryl-coa hydratase ** enoyl-coa hydratase * ec-number: ** [http://en...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOACYLCOATHIOL-RXN KETOACYLCOATHIOL-RXN] ==
+
== Reaction RXN-14266 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** acetyl-coa c-acyltransferase
+
** 3-hydroxyisovaleryl-coa hydratase
−
** 3-ketoacyl-coa thiolase
+
** enoyl-coa hydratase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.16 ec-2.3.1.16]
+
** [http://enzyme.expasy.org/EC/4.2.1.17 ec-4.2.1.17]
−
* synonymous:
 
−
** beta-ketothiolase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[3-KETOACYL-COA]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c]
+
* 1 [[3-HYDROXY-ISOVALERYL-COA]][c] '''<=>''' 1 [[CPD-1083]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ21818]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ21390]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ16470]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ07211]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ21817]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ03584]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ14898]]
+
* Gene: [[SJ14591]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ09371]]
+
* Gene: [[SJ03913]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ10275]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7288]], fatty acid &beta;-oxidation (peroxisome, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7288 PWY-7288]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5136]], fatty acid &beta;-oxidation II (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[FAO-PWY]], fatty acid &beta;-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY66-391]], fatty acid &beta;-oxidation VI (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-391 PWY66-391]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR118591
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21566 21566]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31082 31082]
−
* PIR:
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURTAB XURTAB]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURTAA XURTAA]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURT XURT]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XUHUAB XUHUAB]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XUEC XUEC]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52165 T52165]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52110 T52110]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T07989 T07989]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S72532 S72532]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S57792 S57792]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S36838 S36838]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S33637 S33637]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S22784 S22784]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JS0624 JS0624]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H64890 H64890]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P77525 P77525]
 
−
** [http://www.uniprot.org/uniprot/P28790 P28790]
 
−
** [http://www.uniprot.org/uniprot/P27796 P27796]
 
−
** [http://www.uniprot.org/uniprot/Q08375 Q08375]
 
−
** [http://www.uniprot.org/uniprot/Q05493 Q05493]
 
−
** [http://www.uniprot.org/uniprot/Q42918 Q42918]
 
−
** [http://www.uniprot.org/uniprot/Q43742 Q43742]
 
−
** [http://www.uniprot.org/uniprot/Q56WD9 Q56WD9]
 
−
** [http://www.uniprot.org/uniprot/Q570C8 Q570C8]
 
−
** [http://www.uniprot.org/uniprot/P21151 P21151]
 
−
** [http://www.uniprot.org/uniprot/P09110 P09110]
 
−
** [http://www.uniprot.org/uniprot/P13437 P13437]
 
−
** [http://www.uniprot.org/uniprot/P21775 P21775]
 
−
** [http://www.uniprot.org/uniprot/P07871 P07871]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00391 R00391]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04137 R04137]
−
</div>
+
{{#set: direction=reversible}}
−
{{#set: direction=left-to-right}}
+
{{#set: common-name=enoyl-coa hydratase|3-hydroxyisovaleryl-coa hydratase}}
−
{{#set: common-name=3-ketoacyl-coa thiolase|acetyl-coa c-acyltransferase}}
+
{{#set: ec-number=ec-4.2.1.17}}
−
{{#set: ec-number=ec-2.3.1.16}}
+
{{#set: nb gene associated=6}}
−
{{#set: synonymous=beta-ketothiolase}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb gene associated=5}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: nb pathway associated=4}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-14266

  • direction:
    • reversible
  • common-name:
    • 3-hydroxyisovaleryl-coa hydratase
    • enoyl-coa hydratase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR118591
  • RHEA:
  • LIGAND-RXN:





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