Difference between revisions of "RXN-14266"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOACYLCOATHIOL-RXN KETOACYLCOATHIOL-RXN] == * direction: ** left-to-right * common-name: ** acety...")
(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7589 PWY-7589] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-3...")
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[[Category:reaction]]
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[[Category:pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOACYLCOATHIOL-RXN KETOACYLCOATHIOL-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7589 PWY-7589] ==
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* direction:
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* taxonomic-range:
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** left-to-right
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-33090]
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-1117 tax-1117]
 
* common-name:
 
* common-name:
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** acetyl-coa c-acyltransferase
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** palmitoleate biosynthesis iii (cyanobacteria)
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** 3-ketoacyl-coa thiolase
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== Reaction(s) found ==
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* ec-number:
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* [[RXN-16032]]
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** [http://enzyme.expasy.org/EC/2.3.1.16 ec-2.3.1.16]
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== Reaction(s) not found ==
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* synonymous:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16035 RXN-16035]
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** beta-ketothiolase
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{{#set: taxonomic-range=tax-1117|tax-33090}}
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== Reaction formula ==
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{{#set: common-name=palmitoleate biosynthesis iii (cyanobacteria)}}
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* 1 [[3-KETOACYL-COA]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c]
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{{#set: nb reaction found=1}}
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== Gene(s) associated with this reaction  ==
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{{#set: completion rate=0.5}}
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* Gene: [[SJ21818]]
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{{#set: nb total reaction=2}}
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ16470]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ21817]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ14898]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ09371]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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== Pathway(s) ==
 
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* [[PWY-7288]], fatty acid β-oxidation (peroxisome, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7288 PWY-7288]
 
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** '''4''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-5136]], fatty acid β-oxidation II (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136]
 
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** '''5''' reactions found over '''5''' reactions in the full pathway
 
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* [[FAO-PWY]], fatty acid β-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
 
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** '''6''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY66-391]], fatty acid β-oxidation VI (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-391 PWY66-391]
 
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** '''6''' reactions found over '''7''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21566 21566]
 
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* PIR:
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURTAB XURTAB]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURTAA XURTAA]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURT XURT]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XUHUAB XUHUAB]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XUEC XUEC]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52165 T52165]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52110 T52110]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T07989 T07989]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S72532 S72532]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S57792 S57792]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S36838 S36838]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S33637 S33637]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S22784 S22784]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JS0624 JS0624]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H64890 H64890]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P77525 P77525]
 
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** [http://www.uniprot.org/uniprot/P28790 P28790]
 
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** [http://www.uniprot.org/uniprot/P27796 P27796]
 
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** [http://www.uniprot.org/uniprot/Q08375 Q08375]
 
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** [http://www.uniprot.org/uniprot/Q05493 Q05493]
 
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** [http://www.uniprot.org/uniprot/Q42918 Q42918]
 
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** [http://www.uniprot.org/uniprot/Q43742 Q43742]
 
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** [http://www.uniprot.org/uniprot/Q56WD9 Q56WD9]
 
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** [http://www.uniprot.org/uniprot/Q570C8 Q570C8]
 
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** [http://www.uniprot.org/uniprot/P21151 P21151]
 
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** [http://www.uniprot.org/uniprot/P09110 P09110]
 
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** [http://www.uniprot.org/uniprot/P13437 P13437]
 
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** [http://www.uniprot.org/uniprot/P21775 P21775]
 
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** [http://www.uniprot.org/uniprot/P07871 P07871]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R00391 R00391]
 
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</div>
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=3-ketoacyl-coa thiolase|acetyl-coa c-acyltransferase}}
 
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{{#set: ec-number=ec-2.3.1.16}}
 
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{{#set: synonymous=beta-ketothiolase}}
 
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{{#set: nb gene associated=5}}
 
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{{#set: nb pathway associated=4}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=saccharina_japonica_genome}}
 

Revision as of 09:32, 27 August 2019

Pathway PWY-7589

  • taxonomic-range:
  • common-name:
    • palmitoleate biosynthesis iii (cyanobacteria)

Reaction(s) found

Reaction(s) not found



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