Difference between revisions of "RXN-14268"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5497 PWY-5497] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-1239 tax-12...")
(Created page with "Category:reaction == Reaction RXN-14268 == * direction: ** left-to-right * common-name: ** lauroyl-coa acetyl-coa acyltransferase ** acetyl-coa c-acyltransferase * ec-numb...")
 
(8 intermediate revisions by 3 users not shown)
Line 1: Line 1:
−
[[Category:pathway]]
+
[[Category:reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5497 PWY-5497] ==
+
== Reaction RXN-14268 ==
−
* taxonomic-range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=tax-1239 tax-1239]
+
** left-to-right
 
* common-name:
 
* common-name:
−
** purine nucleobases degradation ii (anaerobic)
+
** lauroyl-coa acetyl-coa acyltransferase
−
== Reaction(s) found ==
+
** acetyl-coa c-acyltransferase
−
* [[1.2.1.2-RXN]]
+
* ec-number:
−
* [[FORMYLTHFDEFORMYL-RXN]]
+
** [http://enzyme.expasy.org/EC/2.3.1.16 ec-2.3.1.16]
−
* [[GLYOHMETRANS-RXN]]
+
== Reaction formula ==
−
* [[GUANINE-DEAMINASE-RXN]]
+
* 1 [[CO-A]][c] '''+''' 1 [[CPD-10284]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[LAUROYLCOA-CPD]][c]
−
* [[METHENYLTHFCYCLOHYDRO-RXN]]
+
== Gene(s) associated with this reaction  ==
−
* [[METHYLENETHFDEHYDROG-NADP-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[PHOSACETYLTRANS-RXN]]
+
* Gene: [[SJ09371]]
−
* [[PYRUFLAVREDUCT-RXN]]
+
** Category: [[annotation]]
−
* [[RXN-15125]]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* [[RXN0-901]]
+
** Category: [[orthology]]
−
== Reaction(s) not found ==
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8753 RXN-8753]
+
* Gene: [[SJ21817]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=R63-RXN R63-RXN]
+
** Category: [[annotation]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8754 RXN-8754]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8751 RXN-8751]
+
* Gene: [[SJ16470]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=GLYCINE-FORMIMINOTRANSFERASE-RXN GLYCINE-FORMIMINOTRANSFERASE-RXN]
+
** Category: [[annotation]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15127 RXN-15127]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15124 RXN-15124]
+
* Gene: [[SJ14898]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=R13-RXN R13-RXN]
+
** Category: [[annotation]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=4.3.1.4-RXN 4.3.1.4-RXN]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* [http://metacyc.org/META/NEW-IMAGE?object=R62-RXN R62-RXN]
+
* Gene: [[SJ21818]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=R127-RXN R127-RXN]
+
** Category: [[annotation]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=ACETATEKIN-RXN ACETATEKIN-RXN]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8752 RXN-8752]
+
** Category: [[orthology]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=R128-RXN R128-RXN]
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
{{#set: taxonomic-range=tax-1239}}
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
{{#set: common-name=purine nucleobases degradation ii (anaerobic)}}
+
</div>
−
{{#set: nb reaction found=10}}
+
== Pathway(s)  ==
−
{{#set: completion rate=0.42}}
+
* [[PWY-7654]], (8E,10E)-dodeca-8,10-dienol biosynthesis:
−
{{#set: nb total reaction=24}}
+
** '''5''' reactions found over '''11''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
== External links  ==
 +
* METANETX-RXN : MNXR95201
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31093 31093]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03858 R03858]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=acetyl-coa c-acyltransferase|lauroyl-coa acetyl-coa acyltransferase}}
 +
{{#set: ec-number=ec-2.3.1.16}}
 +
{{#set: nb gene associated=5}}
 +
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=pathwaytools|pantograph}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN-14268

  • direction:
    • left-to-right
  • common-name:
    • lauroyl-coa acetyl-coa acyltransferase
    • acetyl-coa c-acyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7654, (8E,10E)-dodeca-8,10-dienol biosynthesis:
    • 5 reactions found over 11 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR95201
  • RHEA:
  • LIGAND-RXN:





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-14268&oldid=142134"