Difference between revisions of "RXN-14275"

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(Created page with "Category:reaction == Reaction ADENPRIBOSYLTRAN-RXN == * direction: ** left-to-right * common-name: ** adenine phosphoribosyltransferase * ec-number: ** [http://enzyme.expa...")
(Created page with "Category:reaction == Reaction RXN-14275 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.m19 ec-1.1.1.m19] == Reaction formula == * 1 ...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ADENPRIBOSYLTRAN-RXN ==
+
== Reaction RXN-14275 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** adenine phosphoribosyltransferase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.2.7 ec-2.4.2.7]
+
** [http://enzyme.expasy.org/EC/1.1.1.m19 ec-1.1.1.m19]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ADENINE]][c] '''+''' 1 [[PRPP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[CPD-14916]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CPD0-2106]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15126]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ12523]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7807]], glyphosate degradation III:
+
* [[PWY-6920]], 6-gingerol analog biosynthesis (engineered):
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-6610]], adenine salvage:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7805]], (aminomethyl)phosphonate degradation:
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6605]], adenine and adenosine salvage II:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[P121-PWY]], adenine and adenosine salvage I:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR118593
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16609 16609]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31196 31196]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00190 R00190]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04745 R04745]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P12426 P12426]
 
−
** [http://www.uniprot.org/uniprot/Q9X1A4 Q9X1A4]
 
−
** [http://www.uniprot.org/uniprot/P47202 P47202]
 
−
** [http://www.uniprot.org/uniprot/O34443 O34443]
 
−
** [http://www.uniprot.org/uniprot/O25296 O25296]
 
−
** [http://www.uniprot.org/uniprot/P47518 P47518]
 
−
** [http://www.uniprot.org/uniprot/Q9PP06 Q9PP06]
 
−
** [http://www.uniprot.org/uniprot/P43856 P43856]
 
−
** [http://www.uniprot.org/uniprot/O51718 O51718]
 
−
** [http://www.uniprot.org/uniprot/Q9ZLQ9 Q9ZLQ9]
 
−
** [http://www.uniprot.org/uniprot/P69503 P69503]
 
−
** [http://www.uniprot.org/uniprot/P07741 P07741]
 
−
** [http://www.uniprot.org/uniprot/P08030 P08030]
 
−
** [http://www.uniprot.org/uniprot/P31166 P31166]
 
−
** [http://www.uniprot.org/uniprot/P36973 P36973]
 
−
** [http://www.uniprot.org/uniprot/P52561 P52561]
 
−
** [http://www.uniprot.org/uniprot/Q42563 Q42563]
 
−
** [http://www.uniprot.org/uniprot/Q49639 Q49639]
 
−
** [http://www.uniprot.org/uniprot/P73935 P73935]
 
−
** [http://www.uniprot.org/uniprot/Q9SUW2 Q9SUW2]
 
−
** [http://www.uniprot.org/uniprot/Q43199 Q43199]
 
−
** [http://www.uniprot.org/uniprot/Q9SU38 Q9SU38]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=adenine phosphoribosyltransferase}}
+
{{#set: ec-number=ec-1.1.1.m19}}
−
{{#set: ec-number=ec-2.4.2.7}}
+
{{#set: nb gene associated=0}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb pathway associated=5}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Latest revision as of 11:18, 18 March 2021

Reaction RXN-14275

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6920, 6-gingerol analog biosynthesis (engineered):
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR118593
  • RHEA:
  • LIGAND-RXN:





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