Difference between revisions of "RXN-14285"

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(Created page with "Category:reaction == Reaction ENOYL-ACP-REDUCT-NADH-RXN == * direction: ** left-to-right * common-name: ** 2,3,4-saturated-fatty-acid-[acp] reductase ** 2,3,4-saturated fa...")
(Created page with "Category:reaction == Reaction RXN-11521 == * direction: ** left-to-right == Reaction formula == * 1 7-METHYLXANTHINE[c] '''+''' 1 OXYGEN-MOLECULE[c] '''+''' 1 WA...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ENOYL-ACP-REDUCT-NADH-RXN ==
+
== Reaction RXN-11521 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** 2,3,4-saturated-fatty-acid-[acp] reductase
 
−
** 2,3,4-saturated fatty acyl-[acp]:nad+ oxidoreductase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/1.3.1.9 ec-1.3.1.9]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[TRANS-D2-ENOYL-ACP]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[Saturated-Fatty-Acyl-ACPs]][c]
+
* 1 [[7-METHYLXANTHINE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-12481]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ00320]]
+
* Gene: [[SJ05674]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ03883]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ05668]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ05660]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ13098]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[FASYN-ELONG-PWY]], fatty acid elongation -- saturated:
+
* [[PWY-6632]], caffeine degradation IV (bacteria, via demethylation and oxidation):
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''4''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01403 R01403]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07979 R07979]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P16657 P16657]
 
−
** [http://www.uniprot.org/uniprot/O24990 O24990]
 
−
** [http://www.uniprot.org/uniprot/Q9JSS8 Q9JSS8]
 
−
** [http://www.uniprot.org/uniprot/P0A5Y6 P0A5Y6]
 
−
** [http://www.uniprot.org/uniprot/O84106 O84106]
 
−
** [http://www.uniprot.org/uniprot/Q9PMQ7 Q9PMQ7]
 
−
** [http://www.uniprot.org/uniprot/P07149 P07149]
 
−
** [http://www.uniprot.org/uniprot/P0AEK4 P0AEK4]
 
−
** [http://www.uniprot.org/uniprot/Q51891 Q51891]
 
−
** [http://www.uniprot.org/uniprot/O04945 O04945]
 
−
** [http://www.uniprot.org/uniprot/O04946 O04946]
 
−
** [http://www.uniprot.org/uniprot/O24207 O24207]
 
−
** [http://www.uniprot.org/uniprot/P93062 P93062]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=2,3,4-saturated fatty acyl-[acp]:nad+ oxidoreductase|2,3,4-saturated-fatty-acid-[acp] reductase}}
+
{{#set: nb gene associated=4}}
−
{{#set: ec-number=ec-1.3.1.9}}
 
−
{{#set: nb gene associated=2}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}

Revision as of 11:20, 15 January 2021

Reaction RXN-11521

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6632, caffeine degradation IV (bacteria, via demethylation and oxidation):
    • 4 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-14285&oldid=114050"