Difference between revisions of "RXN-14361"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3661 PWY-3661] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2759 tax-27...")
(Created page with "Category:reaction == Reaction AMPSYN-RXN == * direction: ** reversible * common-name: ** adenylosuccinate lyase * ec-number: ** [http://enzyme.expasy.org/EC/4.3.2.2 ec-4.3...")
Line 1: Line 1:
[[Category:pathway]]
+
[[Category:reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3661 PWY-3661] ==
+
== Reaction AMPSYN-RXN ==
* taxonomic-range:
+
* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=tax-2759 tax-2759]
+
** reversible
** [http://metacyc.org/META/NEW-IMAGE?object=tax-2157 tax-2157]
 
** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
 
 
* common-name:
 
* common-name:
** glycine betaine degradation i
+
** adenylosuccinate lyase
== Reaction(s) found ==
+
* ec-number:
* [[2.1.1.5-RXN]]
+
** [http://enzyme.expasy.org/EC/4.3.2.2 ec-4.3.2.2]
* [[GLYOHMETRANS-RXN]]
+
== Reaction formula ==
* [[RXN-15125]]
+
* 1 [[ADENYLOSUCC]][c] '''<=>''' 1 [[AMP]][c] '''+''' 1 [[FUM]][c]
== Reaction(s) not found ==
+
== Gene(s) associated with this reaction  ==
* [http://metacyc.org/META/NEW-IMAGE?object=SARCOX-RXN SARCOX-RXN]
+
* Gene: [[SJ06544]]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15127 RXN-15127]
+
** Category: [[annotation]]
* [http://metacyc.org/META/NEW-IMAGE?object=DIMETHYLGLYCINE-DEHYDROGENASE-RXN DIMETHYLGLYCINE-DEHYDROGENASE-RXN]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15124 RXN-15124]
+
** Category: [[orthology]]
{{#set: taxonomic-range=tax-2759|tax-2157|tax-2}}
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
{{#set: common-name=glycine betaine degradation i}}
+
== Pathway(s) ==
{{#set: nb reaction found=3}}
+
* [[PWY-7219]], adenosine ribonucleotides de novo biosynthesis:
{{#set: completion rate=0.43}}
+
** '''4''' reactions found over '''3''' reactions in the full pathway
{{#set: nb total reaction=7}}
+
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16856 16856]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01083 R01083]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P21265 P21265]
 +
** [http://www.uniprot.org/uniprot/Q58339 Q58339]
 +
** [http://www.uniprot.org/uniprot/Q9CF40 Q9CF40]
 +
** [http://www.uniprot.org/uniprot/Q9PJ88 Q9PJ88]
 +
** [http://www.uniprot.org/uniprot/Q9JSP3 Q9JSP3]
 +
** [http://www.uniprot.org/uniprot/P0AB89 P0AB89]
 +
** [http://www.uniprot.org/uniprot/O65180 O65180]
 +
** [http://www.uniprot.org/uniprot/P12047 P12047]
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=adenylosuccinate lyase}}
 +
{{#set: ec-number=ec-4.3.2.2}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:44, 18 December 2020

Reaction AMPSYN-RXN

  • direction:
    • reversible
  • common-name:
    • adenylosuccinate lyase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7219, adenosine ribonucleotides de novo biosynthesis:
    • 4 reactions found over 3 reactions in the full pathway

Reconstruction information

External links