Difference between revisions of "RXN-14361"

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(Created page with "Category:reaction == Reaction AMPSYN-RXN == * direction: ** reversible * common-name: ** adenylosuccinate lyase * ec-number: ** [http://enzyme.expasy.org/EC/4.3.2.2 ec-4.3...")
(Created page with "Category:reaction == Reaction RXN-5581 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.5 ec-1.2.1.5] == Reaction formula == * 1 INDOL...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction AMPSYN-RXN ==
+
== Reaction RXN-5581 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* common-name:
 
−
** adenylosuccinate lyase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.3.2.2 ec-4.3.2.2]
+
** [http://enzyme.expasy.org/EC/1.2.1.5 ec-1.2.1.5]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ADENYLOSUCC]][c] '''<=>''' 1 [[AMP]][c] '''+''' 1 [[FUM]][c]
+
* 1 [[INDOLE_ACETALDEHYDE]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[INDOLE_ACETATE_AUXIN]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 2 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ06544]]
+
* Gene: [[SJ06456]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ06470]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7219]], adenosine ribonucleotides de novo biosynthesis:
+
* [[PWY-3162]], L-tryptophan degradation V (side chain pathway):
−
** '''4''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''13''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16856 16856]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30868 30868]
−
* LIGAND-RXN:
+
{{#set: direction=left-to-right}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01083 R01083]
+
{{#set: ec-number=ec-1.2.1.5}}
−
* UNIPROT:
+
{{#set: nb gene associated=2}}
−
** [http://www.uniprot.org/uniprot/P21265 P21265]
 
−
** [http://www.uniprot.org/uniprot/Q58339 Q58339]
 
−
** [http://www.uniprot.org/uniprot/Q9CF40 Q9CF40]
 
−
** [http://www.uniprot.org/uniprot/Q9PJ88 Q9PJ88]
 
−
** [http://www.uniprot.org/uniprot/Q9JSP3 Q9JSP3]
 
−
** [http://www.uniprot.org/uniprot/P0AB89 P0AB89]
 
−
** [http://www.uniprot.org/uniprot/O65180 O65180]
 
−
** [http://www.uniprot.org/uniprot/P12047 P12047]
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=adenylosuccinate lyase}}
 
−
{{#set: ec-number=ec-4.3.2.2}}
 
−
{{#set: nb gene associated=1}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:05, 5 January 2021

Reaction RXN-5581

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-3162, L-tryptophan degradation V (side chain pathway):
    • 2 reactions found over 13 reactions in the full pathway

Reconstruction information

External links





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