Difference between revisions of "RXN-14491"
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(Created page with "Category:reaction == Reaction RXN-16393 == * direction: ** left-to-right * common-name: ** long-chain fatty acid-coa ligase * ec-number: ** [http://enzyme.expasy.org/EC/6....") |
(Created page with "Category:reaction == Reaction ENOYL-COA-DELTA-ISOM-RXN == * direction: ** reversible * common-name: ** δ3-cis-δ2-trans-enoyl-coa isomerase * ec-number: ** [htt...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction RXN | + | == Reaction ENOYL-COA-DELTA-ISOM-RXN == |
* direction: | * direction: | ||
| − | ** | + | ** reversible |
* common-name: | * common-name: | ||
| − | ** | + | ** δ3-cis-δ2-trans-enoyl-coa isomerase |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/5.3.3.8 ec-5.3.3.8] |
| + | * synonymous: | ||
| + | ** probable enoyl coa-hydratase/isomerase | ||
| + | ** probable enoyl-coa hydratase/isomerase | ||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[CIS-DELTA3-ENOYL-COA]][c] '''<=>''' 1 [[TRANS-D2-ENOYL-COA]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | + | * Gene: [[SJ22166]] | |
| − | * Gene: [[ | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| − | * Gene: [[ | + | * Gene: [[SJ07211]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| − | + | * Gene: [[SJ11169]] | |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | * Gene: [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| − | |||
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[PWY- | + | * [[PWY-5137]], fatty acid β-oxidation III (unsaturated, odd number): |
| − | ** ''' | + | ** '''1''' reactions found over '''1''' reactions in the full pathway |
| + | * [[FAO-PWY]], fatty acid β-oxidation I (generic): | ||
| + | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
| − | {{#set: direction= | + | * UNIPROT: |
| − | {{#set: common-name= | + | ** [http://www.uniprot.org/uniprot/P21177 P21177] |
| − | {{#set: ec-number=ec- | + | ** [http://www.uniprot.org/uniprot/P42126 P42126] |
| − | {{#set: nb gene associated= | + | ** [http://www.uniprot.org/uniprot/P07896 P07896] |
| − | {{#set: nb pathway associated= | + | ** [http://www.uniprot.org/uniprot/P23965 P23965] |
| + | ** [http://www.uniprot.org/uniprot/Q64592 Q64592] | ||
| + | ** [http://www.uniprot.org/uniprot/Q7M0E0 Q7M0E0] | ||
| + | ** [http://www.uniprot.org/uniprot/P42125 P42125] | ||
| + | ** [http://www.uniprot.org/uniprot/Q39659 Q39659] | ||
| + | {{#set: direction=reversible}} | ||
| + | {{#set: common-name=δ3-cis-δ2-trans-enoyl-coa isomerase}} | ||
| + | {{#set: ec-number=ec-5.3.3.8}} | ||
| + | {{#set: synonymous=probable enoyl-coa hydratase/isomerase|probable enoyl coa-hydratase/isomerase}} | ||
| + | {{#set: nb gene associated=3}} | ||
| + | {{#set: nb pathway associated=2}} | ||
{{#set: reconstruction category=annotation|orthology}} | {{#set: reconstruction category=annotation|orthology}} | ||
{{#set: reconstruction tool=pathwaytools|pantograph}} | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} | ||
Revision as of 11:23, 15 January 2021
Contents
Reaction ENOYL-COA-DELTA-ISOM-RXN
- direction:
- reversible
- common-name:
- δ3-cis-δ2-trans-enoyl-coa isomerase
- ec-number:
- synonymous:
- probable enoyl coa-hydratase/isomerase
- probable enoyl-coa hydratase/isomerase
Reaction formula
- 1 CIS-DELTA3-ENOYL-COA[c] <=> 1 TRANS-D2-ENOYL-COA[c]
Gene(s) associated with this reaction
- Gene: SJ22166
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ07211
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ11169
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-5137, fatty acid β-oxidation III (unsaturated, odd number):
- 1 reactions found over 1 reactions in the full pathway
- FAO-PWY, fatty acid β-oxidation I (generic):
- 6 reactions found over 7 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
