Difference between revisions of "RXN-14491"

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(Created page with "Category:reaction == Reaction ENOYL-COA-DELTA-ISOM-RXN == * direction: ** reversible * common-name: ** δ3-cis-δ2-trans-enoyl-coa isomerase * ec-number: ** [htt...")
(Created page with "Category:reaction == Reaction RXN-11246 == * direction: ** left-to-right * common-name: ** 3-oxoacyl coa thiolase ** acetyl-coa c-acyltransferase * ec-number: ** [http://e...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ENOYL-COA-DELTA-ISOM-RXN ==
+
== Reaction RXN-11246 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** δ3-cis-δ2-trans-enoyl-coa isomerase
+
** 3-oxoacyl coa thiolase
 +
** acetyl-coa c-acyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.3.3.8 ec-5.3.3.8]
+
** [http://enzyme.expasy.org/EC/2.3.1.16 ec-2.3.1.16]
−
* synonymous:
 
−
** probable enoyl coa-hydratase/isomerase
 
−
** probable enoyl-coa hydratase/isomerase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CIS-DELTA3-ENOYL-COA]][c] '''<=>''' 1 [[TRANS-D2-ENOYL-COA]][c]
+
* 1 [[CO-A]][c] '''+''' 1 [[CPD-10600]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-201]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ22166]]
+
* Gene: [[SJ21818]]
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ07211]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ11169]]
+
* Gene: [[SJ16470]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ14898]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ21817]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ09371]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5137]], fatty acid &beta;-oxidation III (unsaturated, odd number):
+
* [[PWY-6435]], 4-hydroxybenzoate biosynthesis III (plants):
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[FAO-PWY]], fatty acid &beta;-oxidation I (generic):
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/P21177 P21177]
+
{{#set: common-name=acetyl-coa c-acyltransferase|3-oxoacyl coa thiolase}}
−
** [http://www.uniprot.org/uniprot/P42126 P42126]
+
{{#set: ec-number=ec-2.3.1.16}}
−
** [http://www.uniprot.org/uniprot/P07896 P07896]
+
{{#set: nb gene associated=5}}
−
** [http://www.uniprot.org/uniprot/P23965 P23965]
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/Q64592 Q64592]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/Q7M0E0 Q7M0E0]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P42125 P42125]
 
−
** [http://www.uniprot.org/uniprot/Q39659 Q39659]
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=&delta;3-cis-&delta;2-trans-enoyl-coa isomerase}}
 
−
{{#set: ec-number=ec-5.3.3.8}}
 
−
{{#set: synonymous=probable enoyl-coa hydratase/isomerase|probable enoyl coa-hydratase/isomerase}}
 
−
{{#set: nb gene associated=3}}
 
−
{{#set: nb pathway associated=2}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 08:36, 15 March 2021

Reaction RXN-11246

  • direction:
    • left-to-right
  • common-name:
    • 3-oxoacyl coa thiolase
    • acetyl-coa c-acyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6435, 4-hydroxybenzoate biosynthesis III (plants):
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-14491&oldid=128630"