Difference between revisions of "RXN-14491"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.225-RXN 2.4.1.225-RXN] == * direction: ** left-to-right * common-name: ** n-acetylglucosaminy...")
(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33154 tax-3...")
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[[Category:reaction]]
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[[Category:pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.225-RXN 2.4.1.225-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994] ==
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* direction:
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* taxonomic-range:
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** left-to-right
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-33154 tax-33154]
 
* common-name:
 
* common-name:
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** n-acetylglucosaminyl-proteoglycan 4-β-glucuronosyltransferase
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** palmitate biosynthesis i (animals and fungi)
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* ec-number:
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== Reaction(s) found ==
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** [http://enzyme.expasy.org/EC/2.4.1.225 ec-2.4.1.225]
 
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== Reaction formula ==
 
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* 1 [[GlcNAc-GlcA-Gal-Gal-Xyl-Protein]][c] '''+''' 1 [[UDP-GLUCURONATE]][c] '''=>''' 1 [[GlcA-GlcNAc-GlcA-Gal-Gal-Xyl-Protein]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
 
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== Gene(s) associated with this reaction  ==
 
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* Gene: [[SJ11522]]
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* [[3.1.2.21-RXN]]
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** Category: [[annotation]]
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* [[4.2.1.58-RXN]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[4.2.1.59-RXN]]
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* Gene: [[SJ01052]]
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* [[4.2.1.61-RXN]]
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** Category: [[annotation]]
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* [[PALMITOYL-COA-HYDROLASE-RXN]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[RXN-9514]]
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* Gene: [[SJ08300]]
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* [[RXN-9515]]
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** Category: [[annotation]]
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* [[RXN-9518]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[RXN-9520]]
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* Gene: [[SJ08295]]
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* [[RXN-9521]]
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** Category: [[annotation]]
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* [[RXN-9524]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[RXN-9526]]
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* Gene: [[SJ08296]]
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* [[RXN-9528]]
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** Category: [[annotation]]
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* [[RXN-9530]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[RXN-9532]]
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* Gene: [[SJ14184]]
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* [[RXN-9533]]
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** Category: [[annotation]]
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* [[RXN-9534]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[RXN-9536]]
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* Gene: [[SJ14192]]
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* [[RXN-9537]]
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** Category: [[annotation]]
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* [[RXN-9538]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[RXN-9540]]
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* Gene: [[SJ07780]]
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* [[RXN-9542]]
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** Category: [[annotation]]
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* [[RXN-9549]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[RXN-9648]]
 +
* [[RXN-9650]]
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* [[RXN-9651]]
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* [[RXN-9652]]
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* [[RXN-9653]]
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* [[RXN-9654]]
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* [[RXN-9655]]
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* [[RXN3O-9780]]
 
</div>
 
</div>
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== Pathway(s) ==
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== Reaction(s) not found ==
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* [[PWY-6558]], heparan sulfate biosynthesis (late stages): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6558 PWY-6558]
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All reactions of this pathways are in present
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** '''7''' reactions found over '''13''' reactions in the full pathway
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{{#set: taxonomic-range=tax-33154}}
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== Reconstruction information  ==
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{{#set: common-name=palmitate biosynthesis i (animals and fungi)}}
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: nb reaction found=31}}
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== External links  ==
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{{#set: completion rate=1.0}}
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* RHEA:
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{{#set: nb total reaction=31}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20909 20909]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R07335 R07335]
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=n-acetylglucosaminyl-proteoglycan 4-&beta;-glucuronosyltransferase}}
 
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{{#set: ec-number=ec-2.4.1.225}}
 
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{{#set: nb gene associated=8}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=saccharina_japonica_genome}}
 

Revision as of 09:32, 27 August 2019

Pathway PWY-5994

  • taxonomic-range:
  • common-name:
    • palmitate biosynthesis i (animals and fungi)

Reaction(s) found

Reaction(s) not found

All reactions of this pathways are in present



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