Difference between revisions of "RXN-14561"

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(Created page with "Category:reaction == Reaction PHOSGLYPHOS-RXN == * direction: ** reversible * common-name: ** phosphoglycerate kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.2.3...")
(Created page with "Category:reaction == Reaction H2PTEROATESYNTH-RXN == * direction: ** left-to-right * common-name: ** dihydropteroate synthase * ec-number: ** [http://enzyme.expasy.org/EC/...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PHOSGLYPHOS-RXN ==
+
== Reaction H2PTEROATESYNTH-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** phosphoglycerate kinase
+
** dihydropteroate synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.2.3 ec-2.7.2.3]
+
** [http://enzyme.expasy.org/EC/2.5.1.15 ec-2.5.1.15]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[G3P]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[DPG]][c]
+
* 1 [[DIHYDROPTERIN-CH2OH-PP]][c] '''+''' 1 [[P-AMINO-BENZOATE]][c] '''=>''' 1 [[7-8-DIHYDROPTEROATE]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ22398]]
−
* Gene: [[SJ15992]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ05024]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ15991]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ18020]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ15971]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ10780]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-6614]], tetrahydrofolate biosynthesis:
−
* [[PWY66-399]], gluconeogenesis III:
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[GLUCONEO-PWY]], gluconeogenesis I:
 
−
** '''12''' reactions found over '''13''' reactions in the full pathway
 
−
* [[P124-PWY]], Bifidobacterium shunt:
 
−
** '''12''' reactions found over '''15''' reactions in the full pathway
 
−
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle:
 
−
** '''12''' reactions found over '''13''' reactions in the full pathway
 
−
* [[P185-PWY]], formaldehyde assimilation III (dihydroxyacetone cycle):
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[P122-PWY]], heterolactic fermentation:
 
−
** '''16''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY-5484]], glycolysis II (from fructose 6-phosphate):
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-1042]], glycolysis IV (plant cytosol):
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate):
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose):
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-7003]], glycerol degradation to butanol:
 
−
** '''8''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6901]], superpathway of glucose and xylose degradation:
 
−
** '''10''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6886]], 1-butanol autotrophic biosynthesis (engineered):
 
−
** '''8''' reactions found over '''5''' reactions in the full pathway
 
−
* [[SUCSYN-PWY]], sucrose biosynthesis I (from photosynthesis):
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
</div>
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR140085
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14804 14804]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19950 19950]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01512 R01512]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03067 R03067]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P11977 P11977]
+
** [http://www.uniprot.org/uniprot/P0AC11 P0AC11]
−
** [http://www.uniprot.org/uniprot/P09411 P09411]
+
** [http://www.uniprot.org/uniprot/P0AC13 P0AC13]
−
** [http://www.uniprot.org/uniprot/P09041 P09041]
+
** [http://www.uniprot.org/uniprot/Q05851 Q05851]
−
** [http://www.uniprot.org/uniprot/P07205 P07205]
+
** [http://www.uniprot.org/uniprot/Q25704 Q25704]
−
** [http://www.uniprot.org/uniprot/P16617 P16617]
+
** [http://www.uniprot.org/uniprot/P0A578 P0A578]
−
** [http://www.uniprot.org/uniprot/Q37743 Q37743]
+
** [http://www.uniprot.org/uniprot/O84619 O84619]
−
** [http://www.uniprot.org/uniprot/Q58058 Q58058]
+
** [http://www.uniprot.org/uniprot/P0C003 P0C003]
−
** [http://www.uniprot.org/uniprot/P56154 P56154]
+
** [http://www.uniprot.org/uniprot/Q9ZJZ4 Q9ZJZ4]
−
** [http://www.uniprot.org/uniprot/O29119 O29119]
+
** [http://www.uniprot.org/uniprot/Q9CGE2 Q9CGE2]
−
** [http://www.uniprot.org/uniprot/Q01655 Q01655]
+
** [http://www.uniprot.org/uniprot/Q9JT70 Q9JT70]
−
** [http://www.uniprot.org/uniprot/Q9URB3 Q9URB3]
+
** [http://www.uniprot.org/uniprot/P43776 P43776]
−
** [http://www.uniprot.org/uniprot/P47542 P47542]
+
** [http://www.uniprot.org/uniprot/P64139 P64139]
−
** [http://www.uniprot.org/uniprot/O27121 O27121]
+
** [http://www.uniprot.org/uniprot/Q9WXP7 Q9WXP7]
−
** [http://www.uniprot.org/uniprot/Q9PMQ5 Q9PMQ5]
+
** [http://www.uniprot.org/uniprot/O67448 O67448]
−
** [http://www.uniprot.org/uniprot/P40924 P40924]
+
** [http://www.uniprot.org/uniprot/P28822 P28822]
−
** [http://www.uniprot.org/uniprot/P43726 P43726]
+
** [http://www.uniprot.org/uniprot/Q9Z7E8 Q9Z7E8]
−
** [http://www.uniprot.org/uniprot/O66519 O66519]
+
** [http://www.uniprot.org/uniprot/P82602 P82602]
−
** [http://www.uniprot.org/uniprot/Q9JWS8 Q9JWS8]
+
** [http://www.uniprot.org/uniprot/O25830 O25830]
−
** [http://www.uniprot.org/uniprot/Q9CIW1 Q9CIW1]
+
** [http://www.uniprot.org/uniprot/Q9RXY6 Q9RXY6]
−
** [http://www.uniprot.org/uniprot/P36204 P36204]
+
** [http://www.uniprot.org/uniprot/Q9PHT1 Q9PHT1]
−
** [http://www.uniprot.org/uniprot/Q59181 Q59181]
+
** [http://www.uniprot.org/uniprot/Q52352 Q52352]
−
** [http://www.uniprot.org/uniprot/P50319 P50319]
+
** [http://www.uniprot.org/uniprot/Q49184 Q49184]
−
** [http://www.uniprot.org/uniprot/P50310 P50310]
+
** [http://www.uniprot.org/uniprot/Q51161 Q51161]
−
** [http://www.uniprot.org/uniprot/P51903 P51903]
+
** [http://www.uniprot.org/uniprot/P73248 P73248]
−
** [http://www.uniprot.org/uniprot/P18912 P18912]
+
** [http://www.uniprot.org/uniprot/P0C002 P0C002]
−
** [http://www.uniprot.org/uniprot/P41757 P41757]
+
** [http://www.uniprot.org/uniprot/O04862 O04862]
−
** [http://www.uniprot.org/uniprot/P27362 P27362]
+
** [http://www.uniprot.org/uniprot/Q9SZV3 Q9SZV3]
−
** [http://www.uniprot.org/uniprot/P24269 P24269]
+
** [http://www.uniprot.org/uniprot/Q9X8H8 Q9X8H8]
−
** [http://www.uniprot.org/uniprot/P00560 P00560]
+
** [http://www.uniprot.org/uniprot/O75013 O75013]
−
** [http://www.uniprot.org/uniprot/P25055 P25055]
+
** [http://www.uniprot.org/uniprot/P0C0X2 P0C0X2]
−
** [http://www.uniprot.org/uniprot/Q01604 Q01604]
 
−
** [http://www.uniprot.org/uniprot/P00558 P00558]
 
−
** [http://www.uniprot.org/uniprot/P07377 P07377]
 
−
** [http://www.uniprot.org/uniprot/P07378 P07378]
 
−
** [http://www.uniprot.org/uniprot/P14828 P14828]
 
−
** [http://www.uniprot.org/uniprot/P09404 P09404]
 
−
** [http://www.uniprot.org/uniprot/P29408 P29408]
 
−
** [http://www.uniprot.org/uniprot/P20972 P20972]
 
−
** [http://www.uniprot.org/uniprot/P20971 P20971]
 
−
** [http://www.uniprot.org/uniprot/P24590 P24590]
 
−
** [http://www.uniprot.org/uniprot/P29409 P29409]
 
−
** [http://www.uniprot.org/uniprot/P33161 P33161]
 
−
** [http://www.uniprot.org/uniprot/P29405 P29405]
 
−
** [http://www.uniprot.org/uniprot/P50317 P50317]
 
−
** [http://www.uniprot.org/uniprot/P50315 P50315]
 
−
** [http://www.uniprot.org/uniprot/P29407 P29407]
 
−
** [http://www.uniprot.org/uniprot/P61884 P61884]
 
−
** [http://www.uniprot.org/uniprot/Q42542 Q42542]
 
−
** [http://www.uniprot.org/uniprot/P50318 P50318]
 
−
** [http://www.uniprot.org/uniprot/P46712 P46712]
 
−
** [http://www.uniprot.org/uniprot/P78018 P78018]
 
−
** [http://www.uniprot.org/uniprot/Q49073 Q49073]
 
−
** [http://www.uniprot.org/uniprot/Q42961 Q42961]
 
−
** [http://www.uniprot.org/uniprot/Q42962 Q42962]
 
−
** [http://www.uniprot.org/uniprot/O81394 O81394]
 
−
** [http://www.uniprot.org/uniprot/P41758 P41758]
 
−
** [http://www.uniprot.org/uniprot/O32756 O32756]
 
−
** [http://www.uniprot.org/uniprot/P38667 P38667]
 
−
** [http://www.uniprot.org/uniprot/P08966 P08966]
 
−
** [http://www.uniprot.org/uniprot/P08967 P08967]
 
−
** [http://www.uniprot.org/uniprot/P0A799 P0A799]
 
−
** [http://www.uniprot.org/uniprot/P09188 P09188]
 
−
** [http://www.uniprot.org/uniprot/P14228 P14228]
 
−
** [http://www.uniprot.org/uniprot/P08891 P08891]
 
−
** [http://www.uniprot.org/uniprot/P08892 P08892]
 
−
** [http://www.uniprot.org/uniprot/P08893 P08893]
 
−
** [http://www.uniprot.org/uniprot/P12782 P12782]
 
−
** [http://www.uniprot.org/uniprot/P12783 P12783]
 
 
</div>
 
</div>
−
{{#set: direction=reversible}}
+
{{#set: direction=left-to-right}}
−
{{#set: common-name=phosphoglycerate kinase}}
+
{{#set: common-name=dihydropteroate synthase}}
−
{{#set: ec-number=ec-2.7.2.3}}
+
{{#set: ec-number=ec-2.5.1.15}}
−
{{#set: nb gene associated=6}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=14}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 08:35, 15 March 2021

Reaction H2PTEROATESYNTH-RXN

  • direction:
    • left-to-right
  • common-name:
    • dihydropteroate synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6614, tetrahydrofolate biosynthesis:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-14561&oldid=128399"