Difference between revisions of "RXN-14727"

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(Created page with "Category:reaction == Reaction SPERMINE-SYNTHASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.22 ec-2.5.1.22] == Reaction formula...")
(Created page with "Category:reaction == Reaction RXN-14727 == * direction: ** left-to-right * common-name: ** amidase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.1.4 ec-3.5.1.4] == Reac...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction SPERMINE-SYNTHASE-RXN ==
+
== Reaction RXN-14727 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** amidase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.5.1.22 ec-2.5.1.22]
+
** [http://enzyme.expasy.org/EC/3.5.1.4 ec-3.5.1.4]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[S-ADENOSYLMETHIONINAMINE]][c] '''+''' 1 [[SPERMIDINE]][c] '''=>''' 1 [[5-METHYLTHIOADENOSINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SPERMINE]][c]
+
* 1 [[PROPIONAMIDE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[PROPIONATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ19088]]
+
* Gene: [[SJ16279]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ11012]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ05219]]
+
* Gene: [[SJ22527]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ01848]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[ARGSPECAT-PWY]], spermine biosynthesis:
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
* [[POLYAMINSYN3-PWY]], superpathway of polyamine biosynthesis II:
 
** '''4''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
+
* METANETX-RXN : MNXR118878
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19974 19974]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R02869 R02869]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P52788 P52788]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: ec-number=ec-2.5.1.22}}
+
{{#set: common-name=amidase}}
{{#set: nb gene associated=2}}
+
{{#set: ec-number=ec-3.5.1.4}}
{{#set: nb pathway associated=2}}
+
{{#set: nb gene associated=4}}
{{#set: reconstruction category=orthology}}
+
{{#set: nb pathway associated=0}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-14727

  • direction:
    • left-to-right
  • common-name:
    • amidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR118878