Difference between revisions of "RXN-14918"

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(Created page with "Category:reaction == Reaction RXN-1302 == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.311 ec-1.1.1.311] == Reaction formula == * 1 [[NAD]...")
(Created page with "Category:reaction == Reaction 3.4.23.5-RXN == * direction: ** left-to-right * common-name: ** cathepsin d * ec-number: ** [http://enzyme.expasy.org/EC/3.4.23.5 ec-3.4.23.5...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-1302 ==
+
== Reaction 3.4.23.5-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** cathepsin d
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.311 ec-1.1.1.311]
+
** [http://enzyme.expasy.org/EC/3.4.23.5 ec-3.4.23.5]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NAD]][c] '''+''' 1 [[S-1-PHENYLETHANOL]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[PHENYL]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[General-Protein-Substrates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Peptides-holder]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ06444]]
+
* Gene: [[SJ16973]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ17481]]
+
* Gene: [[SJ00305]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
* Gene: [[SJ16977]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-481]], ethylbenzene degradation (anaerobic):
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
* UNIPROT:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05352 R05352]
+
** [http://www.uniprot.org/uniprot/Q9BGU5 Q9BGU5]
−
* RHEA:
+
** [http://www.uniprot.org/uniprot/Q05744 Q05744]
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28201 28201]
+
** [http://www.uniprot.org/uniprot/P07339 P07339]
−
{{#set: direction=reversible}}
+
** [http://www.uniprot.org/uniprot/P18242 P18242]
−
{{#set: ec-number=ec-1.1.1.311}}
+
** [http://www.uniprot.org/uniprot/P24268 P24268]
−
{{#set: nb gene associated=2}}
+
{{#set: direction=left-to-right}}
−
{{#set: nb pathway associated=1}}
+
{{#set: common-name=cathepsin d}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: ec-number=ec-3.4.23.5}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: nb gene associated=3}}
 +
{{#set: nb pathway associated=0}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:01, 5 January 2021

Reaction 3.4.23.5-RXN

  • direction:
    • left-to-right
  • common-name:
    • cathepsin d
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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