Difference between revisions of "RXN-14937"

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(Created page with "Category:reaction == Reaction POLYNUCLEOTIDE-ADENYLYLTRANSFERASE-RXN == * direction: ** left-to-right * common-name: ** poly(a) polymerase * ec-number: ** [http://enzyme.e...")
(Created page with "Category:reaction == Reaction RXN-12561 == * direction: ** left-to-right * common-name: ** β-ketovaleryl-coa thiolase * ec-number: ** [http://enzyme.expasy.org/EC/2.3...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction POLYNUCLEOTIDE-ADENYLYLTRANSFERASE-RXN ==
+
== Reaction RXN-12561 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** poly(a) polymerase
+
** β-ketovaleryl-coa thiolase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.7.19 ec-2.7.7.19]
+
** [http://enzyme.expasy.org/EC/2.3.1.9 ec-2.3.1.9]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[mRNAs]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[mRNAs]][c]
+
* 1 [[CO-A]][c] '''+''' 1 [[CPD-13534]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[PROPIONYL-COA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ09371]]
−
* Gene: [[SJ13196]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ20166]]
+
* Gene: [[SJ14898]]
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ09393]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ02953]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ21225]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ12521]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7948]], 4-oxopentanoate degradation:
 +
** '''2''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P44439 P44439]
 
−
** [http://www.uniprot.org/uniprot/Q9I5A6 Q9I5A6]
 
−
** [http://www.uniprot.org/uniprot/Q9I657 Q9I657]
 
−
** [http://www.uniprot.org/uniprot/Q9JV08 Q9JV08]
 
−
** [http://www.uniprot.org/uniprot/Q9KVV5 Q9KVV5]
 
−
** [http://www.uniprot.org/uniprot/P0ABF1 P0ABF1]
 
−
** [http://www.uniprot.org/uniprot/Q9CFC2 Q9CFC2]
 
−
** [http://www.uniprot.org/uniprot/P07617 P07617]
 
−
** [http://www.uniprot.org/uniprot/P32129 P32129]
 
−
** [http://www.uniprot.org/uniprot/Q98199 Q98199]
 
−
** [http://www.uniprot.org/uniprot/Q98244 Q98244]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=poly(a) polymerase}}
+
{{#set: common-name=&beta;-ketovaleryl-coa thiolase}}
−
{{#set: ec-number=ec-2.7.7.19}}
+
{{#set: ec-number=ec-2.3.1.9}}
−
{{#set: nb gene associated=6}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 11:22, 15 January 2021

Reaction RXN-12561

  • direction:
    • left-to-right
  • common-name:
    • β-ketovaleryl-coa thiolase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7948, 4-oxopentanoate degradation:
    • 2 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-14937&oldid=114902"