Difference between revisions of "RXN-14937"

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(Created page with "Category:reaction == Reaction POLYNUCLEOTIDE-ADENYLYLTRANSFERASE-RXN == * direction: ** left-to-right * common-name: ** poly(a) polymerase * ec-number: ** [http://enzyme.e...")
(Created page with "Category:reaction == Reaction RXN-14937 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.1.2.30 ec-3.1.2.30] == Reaction formula == * 1 CP...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction POLYNUCLEOTIDE-ADENYLYLTRANSFERASE-RXN ==
+
== Reaction RXN-14937 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** poly(a) polymerase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.7.19 ec-2.7.7.19]
+
** [http://enzyme.expasy.org/EC/3.1.2.30 ec-3.1.2.30]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[mRNAs]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[mRNAs]][c]
+
* 1 [[CPD-208]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[MAL]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ03889]]
−
* Gene: [[SJ13196]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ20166]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ09393]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ02953]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ21225]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ12521]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6728]], methylaspartate cycle:
 +
** '''11''' reactions found over '''19''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
* LIGAND-RXN:
−
** [http://www.uniprot.org/uniprot/P44439 P44439]
+
** [http://www.genome.jp/dbget-bin/www_bget?R10612 R10612]
−
** [http://www.uniprot.org/uniprot/Q9I5A6 Q9I5A6]
+
* METANETX-RXN : MNXR113939
−
** [http://www.uniprot.org/uniprot/Q9I657 Q9I657]
+
* RHEA:
−
** [http://www.uniprot.org/uniprot/Q9JV08 Q9JV08]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=38292 38292]
−
** [http://www.uniprot.org/uniprot/Q9KVV5 Q9KVV5]
 
−
** [http://www.uniprot.org/uniprot/P0ABF1 P0ABF1]
 
−
** [http://www.uniprot.org/uniprot/Q9CFC2 Q9CFC2]
 
−
** [http://www.uniprot.org/uniprot/P07617 P07617]
 
−
** [http://www.uniprot.org/uniprot/P32129 P32129]
 
−
** [http://www.uniprot.org/uniprot/Q98199 Q98199]
 
−
** [http://www.uniprot.org/uniprot/Q98244 Q98244]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=poly(a) polymerase}}
+
{{#set: ec-number=ec-3.1.2.30}}
−
{{#set: ec-number=ec-2.7.7.19}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=6}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction RXN-14937

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6728, methylaspartate cycle:
    • 11 reactions found over 19 reactions in the full pathway

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR113939
  • RHEA:





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