Difference between revisions of "RXN-14971"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5939 PWY-5939] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2] *...")
 
(Created page with "Category:reaction == Reaction RXN-14971 == * direction: ** left-to-right * common-name: ** succinate dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.3.5.1 ec-...")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5939 PWY-5939] ==
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== Reaction RXN-14971 ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
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** left-to-right
 
* common-name:
 
* common-name:
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** pyruvate fermentation to  (r)-acetoin ii
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** succinate dehydrogenase
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== Reaction(s) found ==
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* ec-number:
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* [[ACETOLACTSYN-RXN]]
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** [http://enzyme.expasy.org/EC/1.3.5.1 ec-1.3.5.1]
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== Reaction(s) not found ==
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== Reaction formula ==
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* [http://metacyc.org/META/NEW-IMAGE?object=ACETOLACTATE-DECARBOXYLASE-RXN ACETOLACTATE-DECARBOXYLASE-RXN]
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* 1 [[ETR-Quinones]][c] '''+''' 1 [[SUC]][c] '''=>''' 1 [[ETR-Quinols]][c] '''+''' 1 [[FUM]][c]
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{{#set: taxonomic-range=tax-2}}
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== Gene(s) associated with this reaction  ==
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{{#set: common-name=pyruvate fermentation to  (r)-acetoin ii}}
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: nb reaction found=1}}
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* Gene: [[SJ18770]]
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{{#set: completion rate=0.5}}
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** Category: [[orthology]]
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{{#set: nb total reaction=2}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ19480]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ02694]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ17484]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ01012]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ02118]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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</div>
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== Pathway(s) ==
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* [[PWY-6969]], TCA cycle V (2-oxoglutarate synthase):
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** '''10''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-5690]], TCA cycle II (plants and fungi):
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase):
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** '''10''' reactions found over '''9''' reactions in the full pathway
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* [[TCA]], TCA cycle I (prokaryotic):
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** '''9''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-7254]], TCA cycle VII (acetate-producers):
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-561]], superpathway of glyoxylate cycle and fatty acid degradation:
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** '''6''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6728]], methylaspartate cycle:
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** '''11''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=40524 40524]
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{{#set: direction=left-to-right}}
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{{#set: common-name=succinate dehydrogenase}}
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{{#set: ec-number=ec-1.3.5.1}}
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{{#set: nb gene associated=6}}
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{{#set: nb pathway associated=7}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:22, 18 March 2021

Reaction RXN-14971

  • direction:
    • left-to-right
  • common-name:
    • succinate dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6969, TCA cycle V (2-oxoglutarate synthase):
    • 10 reactions found over 9 reactions in the full pathway
  • PWY-5690, TCA cycle II (plants and fungi):
    • 8 reactions found over 9 reactions in the full pathway
  • P105-PWY, TCA cycle IV (2-oxoglutarate decarboxylase):
    • 10 reactions found over 9 reactions in the full pathway
  • TCA, TCA cycle I (prokaryotic):
    • 9 reactions found over 10 reactions in the full pathway
  • PWY-7254, TCA cycle VII (acetate-producers):
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-561, superpathway of glyoxylate cycle and fatty acid degradation:
    • 6 reactions found over 4 reactions in the full pathway
  • PWY-6728, methylaspartate cycle:
    • 11 reactions found over 19 reactions in the full pathway

Reconstruction information

External links





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