Difference between revisions of "RXN-15066"

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(Created page with "Category:reaction == Reaction ACONITATEHYDR-RXN == * direction: ** reversible * common-name: ** cis-aconitate hydratase ** d-threo-isocitrate hydro-lyase (cis-aconitate-fo...")
(Created page with "Category:reaction == Reaction RXN-12587 == * direction: ** reversible * common-name: ** s-sulfanyl-[cysteine desulfurase]:[acceptor protein cysteine] sulfurtransferase * e...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ACONITATEHYDR-RXN ==
+
== Reaction RXN-12587 ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
−
** cis-aconitate hydratase
+
** s-sulfanyl-[cysteine desulfurase]:[acceptor protein cysteine] sulfurtransferase
−
** d-threo-isocitrate hydro-lyase (cis-aconitate-forming)
+
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.8.1.7 ec-2.8.1.7]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CIS-ACONITATE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[THREO-DS-ISO-CITRATE]][c]
+
* 1 [[L-Cysteine-Desulfurase-persulfide]][c] '''+''' 1 [[Unsulfurated-Sulfur-Acceptors]][c] '''<=>''' 1 [[Cysteine-Desulfurase-L-cysteine]][c] '''+''' 1 [[Sulfurated-Sulfur-Acceptors]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ18471]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ17324]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ19133]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ13485]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ04060]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ22396]]
+
* Gene: [[SJ09474]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ03223]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* [[PWY-6549]], L-glutamine biosynthesis III:
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5392]], reductive TCA cycle II:
 
−
** '''6''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-5690]], TCA cycle II (plants and fungi):
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
−
* [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase):
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[TCA]], TCA cycle I (prokaryotic):
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[REDCITCYC]], TCA cycle VI (Helicobacter):
 
−
** '''5''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY66-398]], TCA cycle III (animals):
 
−
** '''10''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-7254]], TCA cycle VII (acetate-producers):
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6969]], TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase):
 
−
** '''10''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-5913]], partial TCA cycle (obligate autotrophs):
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[FERMENTATION-PWY]], mixed acid fermentation:
 
−
** '''11''' reactions found over '''16''' reactions in the full pathway
 
−
* [[P23-PWY]], reductive TCA cycle I:
 
−
** '''9''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-7124]], ethylene biosynthesis V (engineered):
 
−
** '''8''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6728]], methylaspartate cycle:
 
−
** '''11''' reactions found over '''19''' reactions in the full pathway
 
−
* [[GLYOXYLATE-BYPASS]], glyoxylate cycle:
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
</div>
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R11529 R11529]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22147 22147]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=43891 43891]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01900 R01900]
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=d-threo-isocitrate hydro-lyase (cis-aconitate-forming)|cis-aconitate hydratase}}
+
{{#set: common-name=s-sulfanyl-[cysteine desulfurase]:[acceptor protein cysteine] sulfurtransferase}}
−
{{#set: nb gene associated=2}}
+
{{#set: ec-number=ec-2.8.1.7}}
−
{{#set: nb pathway associated=15}}
+
{{#set: nb gene associated=6}}
 +
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 19:07, 14 January 2021

Reaction RXN-12587

  • direction:
    • reversible
  • common-name:
    • s-sulfanyl-[cysteine desulfurase]:[acceptor protein cysteine] sulfurtransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Property "Common-name" (as page type) with input value "s-sulfanyl-[cysteine desulfurase]:[acceptor protein cysteine] sulfurtransferase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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