Difference between revisions of "RXN-15115"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14.11.16 ec-1.14.11.16...")
(Created page with "Category:reaction == Reaction RXN-18303 == * direction: ** left-to-right * common-name: ** galactosylceramide sulfotransferase ** digalactosylceramide sulfotransferase * e...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN ==
+
== Reaction RXN-18303 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** galactosylceramide sulfotransferase
 +
** digalactosylceramide sulfotransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.14.11.16 ec-1.14.11.16]
+
** [http://enzyme.expasy.org/EC/2.8.2.11 ec-2.8.2.11]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[Protein-L-Aspartates]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[Peptide-3-hydroxy-L-Aspartates]][c] '''+''' 1 [[SUC]][c]
+
* 1 [[Digalactosylceramides]][c] '''+''' 1 [[PAPS]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[Digalactosylceramide-sulfate]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07629]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** Category: [[orthology]]
+
* Gene: [[SJ18184]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
* Gene: [[SJ12047]]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ11352]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ09376]]
+
* Gene: [[SJ05173]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ13394]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ20074]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
* Gene: [[SJ19825]]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ13400]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ13393]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ11525]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ09270]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ10867]]
+
* Gene: [[SJ21441]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ14141]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ05785]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
+
</div>
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7840]], gala-series glycosphingolipids biosynthesis:
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11508 11508]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04073 R04073]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q28056 Q28056]
 
−
** [http://www.uniprot.org/uniprot/Q93178 Q93178]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-1.14.11.16}}
+
{{#set: common-name=digalactosylceramide sulfotransferase|galactosylceramide sulfotransferase}}
−
{{#set: nb gene associated=5}}
+
{{#set: ec-number=ec-2.8.2.11}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb gene associated=12}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 11:21, 15 January 2021

Reaction RXN-18303

  • direction:
    • left-to-right
  • common-name:
    • galactosylceramide sulfotransferase
    • digalactosylceramide sulfotransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7840, gala-series glycosphingolipids biosynthesis:
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-15115&oldid=114345"